基于迭代模板的HPC环境下科学应用的高级并行编程框架

Md Bulbul Sharif, S. Ghafoor
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引用次数: 0

摘要

为分布式环境开发高性能并行应用程序具有挑战性,需要HPC系统和应用程序领域的专业知识。我们开发了一个名为APPFIS的基于c++的框架,它通过为开发性能可移植的基于网格的结构化模板应用程序提供一个易于使用的界面,从而隐藏了系统的复杂性。APPFIS的用户界面与硬件无关,并为分布式HPC环境中的模板应用程序提供分区、代码优化和自动通信。此外,它还提供了直接的api,用于利用多个GPU加速器、共享内存和节点级并行,并自动优化计算和通信重叠。我们使用三个平台上的几个应用程序测试了APPFIS的功能和性能(德克萨斯高级计算中心的Stampede2、匹兹堡超级计算中心的Bridges-2和橡树岭国家实验室的Summit超级计算机)。实验结果表明,在4096个cpu和384个gpu的情况下,具有良好的强扩展性和弱扩展性,性能与手工调优代码相当。
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APPFIS: An Advanced Parallel Programming Framework for Iterative Stencil Based Scientific Applications in HPC Environments
Developing performant parallel applications for the distributed environment is challenging and requires expertise in both the HPC system and the application domain. We have developed a C++-based framework called APPFIS that hides the system complexities by providing an easy-to-use interface for developing performance portable structured grid-based stencil applications. APPFIS’s user interface is hardware agnostic and provides partitioning, code optimization, and automatic communication for stencil applications in distributed HPC environment. In addition, it offers straightforward APIs for utilizing multiple GPU accelerators, shared memory, and node-level parallelizations with automatic optimization for computation and communication overlapping. We have tested the functionality and performance of APPFIS using several applications on three platforms (Stampede2 at Texas Advanced Computing Center, Bridges-2 at Pittsburgh Supercomputing Center, and Summit Supercomputer at Oak Ridge National Laboratory). Experimental results show comparable performance to hand-tuned code with an excellent strong and weak scalability up to 4096 CPUs and 384 GPUs.
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