通过开放授粉后代的交配系统和遗传多样性评估马考巴棕榈[Acrocomia aculeata (Jacq.) Lodd.

IF 2.2 3区 农林科学 Q2 AGRICULTURE, MULTIDISCIPLINARY Annals of Applied Biology Pub Date : 2023-11-14 DOI:10.1111/aab.12879
Brenda G. Díaz-Hernández, Carlos A. Colombo, Jonathan A. Morales-Marroquín, Mariana Sanitá-Rodrigues, Joaquim A. Azevedo-Filho, Maria I. Zucchi
{"title":"通过开放授粉后代的交配系统和遗传多样性评估马考巴棕榈[Acrocomia aculeata (Jacq.) Lodd.","authors":"Brenda G. Díaz-Hernández,&nbsp;Carlos A. Colombo,&nbsp;Jonathan A. Morales-Marroquín,&nbsp;Mariana Sanitá-Rodrigues,&nbsp;Joaquim A. Azevedo-Filho,&nbsp;Maria I. Zucchi","doi":"10.1111/aab.12879","DOIUrl":null,"url":null,"abstract":"<p>At present, intelligent and sustainable agriculture presupposes a compromise between maximising crop yield and minimising its risk of genetic vulnerability. Breeding programmes should implement strategies that allow the development of superior genotypes and preserve genetic diversity, especially in perennial plants. The Macaúba palm (<i>Acrocomia aculeata</i>) is a species with the potential to produce oil at a level comparable to that of the oil palm, even in water-deficient areas, which motivates its commercial interest and drives an increase in demand for seedlings from natural populations for commercial plantations. Therefore, to evaluate the impact of this selection procedure on the reduction of genetic diversity and, consequently, the genetic vulnerability of commercial planting, in the present study we analysed the population mating system and the genetic diversity of Open-Pollinated Progenies (OPPs) from selected seed-trees in relation to the genetic diversity of respective native populations (NPs). To achieve this, we evaluated the mating system and genetic diversity employing 14 microsatellite markers (SSR). The mating system indices estimated for <i>A. aculeata</i> palm indicated that the species present a mixed mating system (<math>\n <mrow>\n <msub>\n <mover>\n <mi>t</mi>\n <mo>̂</mo>\n </mover>\n <mi>m</mi>\n </msub>\n <mo>=</mo>\n <mn>0.877</mn>\n </mrow></math>) with a predominance of outcrossing. However, at the population level, the outcrossing rate ranged from <math>\n <mrow>\n <msub>\n <mover>\n <mi>t</mi>\n <mo>̂</mo>\n </mover>\n <mi>m</mi>\n </msub>\n <mo>=</mo>\n <mn>0.986</mn>\n <mspace></mspace>\n <mtext>to</mtext>\n <mspace></mspace>\n <mn>1.00</mn>\n </mrow></math>. The biparental inbreeding rate was considered moderate (<math>\n <mrow>\n <msub>\n <mover>\n <mi>t</mi>\n <mo>̂</mo>\n </mover>\n <mi>m</mi>\n </msub>\n <mo>−</mo>\n <msub>\n <mover>\n <mi>t</mi>\n <mo>̂</mo>\n </mover>\n <mi>s</mi>\n </msub>\n <mo>=</mo>\n <mn>0.312</mn>\n </mrow></math>), with some variation between populations (from 0.0005 to 0.275). The multilocus correlated paternity was <math>\n <mrow>\n <msub>\n <mover>\n <mi>r</mi>\n <mo>̂</mo>\n </mover>\n <mi>p</mi>\n </msub>\n <mo>=</mo>\n <mn>0.389</mn>\n </mrow></math>, ranging from 0 to 0.112 at population level, indicating that a significant portion of the progeny consisted of half-sibs. The results demonstrate that there was no significant loss of genetic diversity of OPPs derived from artificial selection within NPs. In the OPPs the number of alleles (Na = 2.55) was similar to that of NP (Na = 2.56). Furthermore, the mean values of observed heterozygosity (<i>H</i><sub><i>O</i></sub>) between NP and OPPs were similar, with a mean of 0.366 and 0.356, respectively. In conclusion, the procedure adopted to produce commercial seedlings in the present study should not represent a high risk of genetic vulnerability. In addition, our results will provide a guidance to breeders regarding selection intensity in both natural and improved populations, aiming to optimise the advancement of generations, thereby maximising future genetic gains while preserving genetic diversity. However, we recommend verifying the outcrossing rate and genetic diversity at the population level, as these factors could have significant effects on the vulnerability of the species and the macaúba crop.</p>","PeriodicalId":7977,"journal":{"name":"Annals of Applied Biology","volume":"184 2","pages":"238-249"},"PeriodicalIF":2.2000,"publicationDate":"2023-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Assessing the genetic vulnerability of Macaúba palm [Acrocomia aculeata (Jacq.) Lodd. ex Mart.] through the mating system and genetic diversity of open-pollinated progenies\",\"authors\":\"Brenda G. Díaz-Hernández,&nbsp;Carlos A. Colombo,&nbsp;Jonathan A. Morales-Marroquín,&nbsp;Mariana Sanitá-Rodrigues,&nbsp;Joaquim A. Azevedo-Filho,&nbsp;Maria I. Zucchi\",\"doi\":\"10.1111/aab.12879\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>At present, intelligent and sustainable agriculture presupposes a compromise between maximising crop yield and minimising its risk of genetic vulnerability. Breeding programmes should implement strategies that allow the development of superior genotypes and preserve genetic diversity, especially in perennial plants. The Macaúba palm (<i>Acrocomia aculeata</i>) is a species with the potential to produce oil at a level comparable to that of the oil palm, even in water-deficient areas, which motivates its commercial interest and drives an increase in demand for seedlings from natural populations for commercial plantations. Therefore, to evaluate the impact of this selection procedure on the reduction of genetic diversity and, consequently, the genetic vulnerability of commercial planting, in the present study we analysed the population mating system and the genetic diversity of Open-Pollinated Progenies (OPPs) from selected seed-trees in relation to the genetic diversity of respective native populations (NPs). To achieve this, we evaluated the mating system and genetic diversity employing 14 microsatellite markers (SSR). The mating system indices estimated for <i>A. aculeata</i> palm indicated that the species present a mixed mating system (<math>\\n <mrow>\\n <msub>\\n <mover>\\n <mi>t</mi>\\n <mo>̂</mo>\\n </mover>\\n <mi>m</mi>\\n </msub>\\n <mo>=</mo>\\n <mn>0.877</mn>\\n </mrow></math>) with a predominance of outcrossing. However, at the population level, the outcrossing rate ranged from <math>\\n <mrow>\\n <msub>\\n <mover>\\n <mi>t</mi>\\n <mo>̂</mo>\\n </mover>\\n <mi>m</mi>\\n </msub>\\n <mo>=</mo>\\n <mn>0.986</mn>\\n <mspace></mspace>\\n <mtext>to</mtext>\\n <mspace></mspace>\\n <mn>1.00</mn>\\n </mrow></math>. The biparental inbreeding rate was considered moderate (<math>\\n <mrow>\\n <msub>\\n <mover>\\n <mi>t</mi>\\n <mo>̂</mo>\\n </mover>\\n <mi>m</mi>\\n </msub>\\n <mo>−</mo>\\n <msub>\\n <mover>\\n <mi>t</mi>\\n <mo>̂</mo>\\n </mover>\\n <mi>s</mi>\\n </msub>\\n <mo>=</mo>\\n <mn>0.312</mn>\\n </mrow></math>), with some variation between populations (from 0.0005 to 0.275). The multilocus correlated paternity was <math>\\n <mrow>\\n <msub>\\n <mover>\\n <mi>r</mi>\\n <mo>̂</mo>\\n </mover>\\n <mi>p</mi>\\n </msub>\\n <mo>=</mo>\\n <mn>0.389</mn>\\n </mrow></math>, ranging from 0 to 0.112 at population level, indicating that a significant portion of the progeny consisted of half-sibs. The results demonstrate that there was no significant loss of genetic diversity of OPPs derived from artificial selection within NPs. In the OPPs the number of alleles (Na = 2.55) was similar to that of NP (Na = 2.56). Furthermore, the mean values of observed heterozygosity (<i>H</i><sub><i>O</i></sub>) between NP and OPPs were similar, with a mean of 0.366 and 0.356, respectively. In conclusion, the procedure adopted to produce commercial seedlings in the present study should not represent a high risk of genetic vulnerability. In addition, our results will provide a guidance to breeders regarding selection intensity in both natural and improved populations, aiming to optimise the advancement of generations, thereby maximising future genetic gains while preserving genetic diversity. However, we recommend verifying the outcrossing rate and genetic diversity at the population level, as these factors could have significant effects on the vulnerability of the species and the macaúba crop.</p>\",\"PeriodicalId\":7977,\"journal\":{\"name\":\"Annals of Applied Biology\",\"volume\":\"184 2\",\"pages\":\"238-249\"},\"PeriodicalIF\":2.2000,\"publicationDate\":\"2023-11-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Annals of Applied Biology\",\"FirstCategoryId\":\"97\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/aab.12879\",\"RegionNum\":3,\"RegionCategory\":\"农林科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"AGRICULTURE, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Annals of Applied Biology","FirstCategoryId":"97","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/aab.12879","RegionNum":3,"RegionCategory":"农林科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"AGRICULTURE, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

目前,智慧型可持续农业的前提是在作物产量最大化和基因脆弱性风险最小化之间达成妥协。育种计划应实施既能培育优良基因型又能保护基因多样性的战略,特别是在多年生植物中。马考巴棕榈(Acrocomia aculeata)是一种具有产油潜力的物种,即使在缺水地区,其产油量也可与油棕榈媲美。因此,为了评估这种选育程序对遗传多样性减少的影响,以及商业种植的遗传脆弱性,我们在本研究中分析了种群交配系统以及选育种子树开放授粉后代(OPP)的遗传多样性与各自原生种群(NP)遗传多样性的关系。为此,我们利用 14 个微卫星标记(SSR)对交配系统和遗传多样性进行了评估。估计的 A. aculeata 棕榈交配系统指数表明,该物种具有混合交配系统(t ̂ m = 0.877),以外交为主。然而,在种群水平上,外交率从 t ̂ m = 0.986 到 1.00 不等。双亲近交率被认为是中等的(t ̂ m - t ̂ s = 0.312),不同种群之间存在一些差异(从 0.0005 到 0.275)。在种群水平上,多焦点相关亲子关系为 r ̂ p = 0.389,范围从 0 到 0.112,表明后代中有相当一部分是半同父异母的。结果表明,在 NPs 内进行人工选择后,OPPs 的遗传多样性没有明显损失。在 OPPs 中,等位基因数(Na = 2.55)与 NP(Na = 2.56)相似。此外,NP 和 OPPs 的观察杂合度(HO)平均值也相似,分别为 0.366 和 0.356。总之,本研究采用的生产商用种苗的程序不代表遗传脆弱性的高风险。此外,我们的研究结果将为育种者在自然种群和改良种群中的选择强度提供指导,目的是优化世代进展,从而在保护遗传多样性的同时最大限度地提高未来的遗传收益。不过,我们建议在种群水平上验证杂交率和遗传多样性,因为这些因素可能会对物种和玛咖巴作物的脆弱性产生重大影响。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

摘要图片

摘要图片

查看原文
分享 分享
微信好友 朋友圈 QQ好友 复制链接
本刊更多论文
Assessing the genetic vulnerability of Macaúba palm [Acrocomia aculeata (Jacq.) Lodd. ex Mart.] through the mating system and genetic diversity of open-pollinated progenies

At present, intelligent and sustainable agriculture presupposes a compromise between maximising crop yield and minimising its risk of genetic vulnerability. Breeding programmes should implement strategies that allow the development of superior genotypes and preserve genetic diversity, especially in perennial plants. The Macaúba palm (Acrocomia aculeata) is a species with the potential to produce oil at a level comparable to that of the oil palm, even in water-deficient areas, which motivates its commercial interest and drives an increase in demand for seedlings from natural populations for commercial plantations. Therefore, to evaluate the impact of this selection procedure on the reduction of genetic diversity and, consequently, the genetic vulnerability of commercial planting, in the present study we analysed the population mating system and the genetic diversity of Open-Pollinated Progenies (OPPs) from selected seed-trees in relation to the genetic diversity of respective native populations (NPs). To achieve this, we evaluated the mating system and genetic diversity employing 14 microsatellite markers (SSR). The mating system indices estimated for A. aculeata palm indicated that the species present a mixed mating system ( t ̂ m = 0.877 ) with a predominance of outcrossing. However, at the population level, the outcrossing rate ranged from t ̂ m = 0.986 to 1.00 . The biparental inbreeding rate was considered moderate ( t ̂ m t ̂ s = 0.312 ), with some variation between populations (from 0.0005 to 0.275). The multilocus correlated paternity was r ̂ p = 0.389 , ranging from 0 to 0.112 at population level, indicating that a significant portion of the progeny consisted of half-sibs. The results demonstrate that there was no significant loss of genetic diversity of OPPs derived from artificial selection within NPs. In the OPPs the number of alleles (Na = 2.55) was similar to that of NP (Na = 2.56). Furthermore, the mean values of observed heterozygosity (HO) between NP and OPPs were similar, with a mean of 0.366 and 0.356, respectively. In conclusion, the procedure adopted to produce commercial seedlings in the present study should not represent a high risk of genetic vulnerability. In addition, our results will provide a guidance to breeders regarding selection intensity in both natural and improved populations, aiming to optimise the advancement of generations, thereby maximising future genetic gains while preserving genetic diversity. However, we recommend verifying the outcrossing rate and genetic diversity at the population level, as these factors could have significant effects on the vulnerability of the species and the macaúba crop.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Annals of Applied Biology
Annals of Applied Biology 生物-农业综合
CiteScore
5.50
自引率
0.00%
发文量
71
审稿时长
18-36 weeks
期刊介绍: Annals of Applied Biology is an international journal sponsored by the Association of Applied Biologists. The journal publishes original research papers on all aspects of applied research on crop production, crop protection and the cropping ecosystem. The journal is published both online and in six printed issues per year. Annals papers must contribute substantially to the advancement of knowledge and may, among others, encompass the scientific disciplines of: Agronomy Agrometeorology Agrienvironmental sciences Applied genomics Applied metabolomics Applied proteomics Biodiversity Biological control Climate change Crop ecology Entomology Genetic manipulation Molecular biology Mycology Nematology Pests Plant pathology Plant breeding & genetics Plant physiology Post harvest biology Soil science Statistics Virology Weed biology Annals also welcomes reviews of interest in these subject areas. Reviews should be critical surveys of the field and offer new insights. All papers are subject to peer review. Papers must usually contribute substantially to the advancement of knowledge in applied biology but short papers discussing techniques or substantiated results, and reviews of current knowledge of interest to applied biologists will be considered for publication. Papers or reviews must not be offered to any other journal for prior or simultaneous publication and normally average seven printed pages.
期刊最新文献
Issue Information Consensus QTL map deciphered genes and pathways regulating tolerance to post-flowering diseases in maize The effects of humic substances application on the phytohormone profile in Lactuca sativa L. Phenological growth stages of Amaranthus palmeri according to the extended BBCH scale Cover Image
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
现在去查看 取消
×
提示
确定
0
微信
客服QQ
Book学术公众号 扫码关注我们
反馈
×
意见反馈
请填写您的意见或建议
请填写您的手机或邮箱
已复制链接
已复制链接
快去分享给好友吧!
我知道了
×
扫码分享
扫码分享
Book学术官方微信
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术
文献互助 智能选刊 最新文献 互助须知 联系我们:info@booksci.cn
Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。
Copyright © 2023 Book学术 All rights reserved.
ghs 京公网安备 11010802042870号 京ICP备2023020795号-1