{"title":"更正 \"欢迎来到大叶子\"：改进非模式植物基因组注释的最佳实践","authors":"","doi":"10.1002/aps3.11553","DOIUrl":null,"url":null,"abstract":"<p>Vuruputoor, V. S., D. Monyak, K. C. Fetter, C. Webster, A. Bhattarai, B. Shrestha, S. Zaman, et al. 2023. Welcome to the big leaves: Best practices for improving genome annotation in non-model plant genomes. <i>Applications in Plant Sciences</i> 11(4): e11533.</p><p>Figure 4 in the published manuscript contained the following errors. Figure 4A and 4B were missing violin plots for MAKER, which should have been colored green. Figure 4C incorrectly displayed the ideal range of scores—the yellow bar should have spanned 85 to 100 instead of the range shown. Additionally, the color scheme was incorrect. The BRAKER runs should have been colored blue and the StringTie2 runs should have been red. The corrected Figure 4 is presented here with its original caption, which was correct.</p><p>We apologize for this error.</p>","PeriodicalId":8022,"journal":{"name":"Applications in Plant Sciences","volume":"11 6","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2023-11-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://bsapubs.onlinelibrary.wiley.com/doi/epdf/10.1002/aps3.11553","citationCount":"1","resultStr":"{\"title\":\"Correction to Welcome to the big leaves: Best practices for improving genome annotation in non-model plant genomes\",\"authors\":\"\",\"doi\":\"10.1002/aps3.11553\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Vuruputoor, V. S., D. Monyak, K. C. Fetter, C. Webster, A. Bhattarai, B. Shrestha, S. Zaman, et al. 2023. Welcome to the big leaves: Best practices for improving genome annotation in non-model plant genomes. <i>Applications in Plant Sciences</i> 11(4): e11533.</p><p>Figure 4 in the published manuscript contained the following errors. Figure 4A and 4B were missing violin plots for MAKER, which should have been colored green. Figure 4C incorrectly displayed the ideal range of scores—the yellow bar should have spanned 85 to 100 instead of the range shown. Additionally, the color scheme was incorrect. The BRAKER runs should have been colored blue and the StringTie2 runs should have been red. The corrected Figure 4 is presented here with its original caption, which was correct.</p><p>We apologize for this error.</p>\",\"PeriodicalId\":8022,\"journal\":{\"name\":\"Applications in Plant Sciences\",\"volume\":\"11 6\",\"pages\":\"\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2023-11-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://bsapubs.onlinelibrary.wiley.com/doi/epdf/10.1002/aps3.11553\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Applications in Plant Sciences\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/aps3.11553\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PLANT SCIENCES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applications in Plant Sciences","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/aps3.11553","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 1
摘要
Vuruputoor, V. S, D. Monyak, K. C. Fetter, C. Webster, A. Bhattarai, B. Shrestha, S. Zaman等。2023。欢迎来到大叶子:改进非模式植物基因组注释的最佳实践。植物科学应用11(4):e11533。已发表稿件中的图4包含以下错误。图4A和4B缺少MAKER的小提琴情节，应该用绿色标注。图4C错误地显示了分数的理想范围——黄色条应该跨越85到100，而不是显示的范围。此外，配色方案也不正确。BRAKER的运行应该是蓝色的，StringTie2的运行应该是红色的。更正后的图4显示在这里，其原始标题是正确的。我们为这个错误道歉。
Correction to Welcome to the big leaves: Best practices for improving genome annotation in non-model plant genomes
Vuruputoor, V. S., D. Monyak, K. C. Fetter, C. Webster, A. Bhattarai, B. Shrestha, S. Zaman, et al. 2023. Welcome to the big leaves: Best practices for improving genome annotation in non-model plant genomes. Applications in Plant Sciences 11(4): e11533.
Figure 4 in the published manuscript contained the following errors. Figure 4A and 4B were missing violin plots for MAKER, which should have been colored green. Figure 4C incorrectly displayed the ideal range of scores—the yellow bar should have spanned 85 to 100 instead of the range shown. Additionally, the color scheme was incorrect. The BRAKER runs should have been colored blue and the StringTie2 runs should have been red. The corrected Figure 4 is presented here with its original caption, which was correct.
期刊介绍：
Applications in Plant Sciences (APPS) is a monthly, peer-reviewed, open access journal promoting the rapid dissemination of newly developed, innovative tools and protocols in all areas of the plant sciences, including genetics, structure, function, development, evolution, systematics, and ecology. Given the rapid progress today in technology and its application in the plant sciences, the goal of APPS is to foster communication within the plant science community to advance scientific research. APPS is a publication of the Botanical Society of America, originating in 2009 as the American Journal of Botany''s online-only section, AJB Primer Notes & Protocols in the Plant Sciences.
APPS publishes the following types of articles: (1) Protocol Notes describe new methods and technological advancements; (2) Genomic Resources Articles characterize the development and demonstrate the usefulness of newly developed genomic resources, including transcriptomes; (3) Software Notes detail new software applications; (4) Application Articles illustrate the application of a new protocol, method, or software application within the context of a larger study; (5) Review Articles evaluate available techniques, methods, or protocols; (6) Primer Notes report novel genetic markers with evidence of wide applicability.
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