阿尔伯塔省地下水中候选门辐射(CPR)的突出

Damon Mosier
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摘要

地下水是日常生活的重要组成部分,用于农业灌溉,支持许多工业过程,并为许多人提供饮用水。它也是各种未知微生物群落的家园。在加拿大的阿尔伯塔省尤其如此,因为该地区有着丰富的地质历史,而且含水层位置靠近油砂丰富的地区、农业地区和人口稠密的城市。通过与艾伯塔省政府环境和保护区部门的合作,我们可以在全省范围内使用250多口井,其中25口被选中用于宏基因组学分析。超过750个宏基因组组装的基因组被恢复,并与历史地球化学、同位素和溶解气体数据相结合,使我们能够解释居住在阿尔伯塔省地下水中的微生物群落的生活方式。结果显示,参与c1循环的生物大量存在,表明存在生产性的地下环境,以及属于候选辐射门(CPR)的成员。我们探讨了CPR可能的作用,包括它们通过次生代谢物进行生态相互作用的潜力。这项研究表明,阿尔伯塔省地下水是多样化、多产的微生物群落的家园,这些微生物群落有能力进一步提高我们在微生物生态学方面的知识。
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Prominence of Candidate Phyla Radiation (CPR) in Alberta Groundwater
Groundwater is an essential part of everyday life, serving as agricultural irrigation, supporting numerous industrial processes, and providing drinking water for many. It is also home to a diverse range of unexplored microbial communities. This is especially true in Alberta, Canada, due to the rich geological history of the region and the close proximity of aquifer locations to areas ranging from oil sand-rich to agricultural to populous cities. Through collaborations with the Environment and Protected Areas division of the Alberta government we have access to more than 250 wells throughout the province, 25 of which were selected for metagenomics analysis. More than 750 metagenome-assembled genomes were recovered and coupled with historic geochemical, isotopic, and dissolved gas data, allowing us to interpret the lifestyles of microbial communities inhabiting Alberta groundwater. Results show a strong presence of organisms involved in C1-cycling, indicative of a productive subsurface environment, as well as members belonging to the Candidate Phyla Radiation (CPR). We explore likely roles of CPR, including their potential for ecological interactions via secondary metabolites. This research shows that Alberta groundwater is home to diverse, productive microbial communities that have the capacity to further our knowledge in microbial ecology.
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