{"title":"核酸和蛋白质功能域的距离分析和序列特性","authors":"Andrzej K. Konopka, Devjani Chatterjee","doi":"10.1016/0735-0651(88)90001-5","DOIUrl":null,"url":null,"abstract":"<div><p>We present a unified algorithm to analyze distances between short oligomers in large collections of nucleic acids and protein sequences (<span>DISTANP</span>). This extended version of <span>DISTAN</span> methodology not only permits analysis of distances between selected pairs of oligomers, but also allows a user to analyze distances between groups of residues (such as acidic and hydrophobic amino acids). This capacity allows differentiation of sequence properties of known functional domains in nucleic acids and proteins.</p></div>","PeriodicalId":77714,"journal":{"name":"Gene analysis techniques","volume":"5 5","pages":"Pages 87-93"},"PeriodicalIF":0.0000,"publicationDate":"1988-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1016/0735-0651(88)90001-5","citationCount":"10","resultStr":"{\"title\":\"Distance analysis and sequence properties of functional domains in nucleic acids and proteins\",\"authors\":\"Andrzej K. Konopka, Devjani Chatterjee\",\"doi\":\"10.1016/0735-0651(88)90001-5\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>We present a unified algorithm to analyze distances between short oligomers in large collections of nucleic acids and protein sequences (<span>DISTANP</span>). This extended version of <span>DISTAN</span> methodology not only permits analysis of distances between selected pairs of oligomers, but also allows a user to analyze distances between groups of residues (such as acidic and hydrophobic amino acids). This capacity allows differentiation of sequence properties of known functional domains in nucleic acids and proteins.</p></div>\",\"PeriodicalId\":77714,\"journal\":{\"name\":\"Gene analysis techniques\",\"volume\":\"5 5\",\"pages\":\"Pages 87-93\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"1988-09-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://sci-hub-pdf.com/10.1016/0735-0651(88)90001-5\",\"citationCount\":\"10\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Gene analysis techniques\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/0735065188900015\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene analysis techniques","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/0735065188900015","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Distance analysis and sequence properties of functional domains in nucleic acids and proteins
We present a unified algorithm to analyze distances between short oligomers in large collections of nucleic acids and protein sequences (DISTANP). This extended version of DISTAN methodology not only permits analysis of distances between selected pairs of oligomers, but also allows a user to analyze distances between groups of residues (such as acidic and hydrophobic amino acids). This capacity allows differentiation of sequence properties of known functional domains in nucleic acids and proteins.