MoveR:一个R软件包,用于轻松处理和分析动物视频跟踪数据

Quentin PETITJEAN, Silene LARTIGUE, Melina COINTE, Nicolas RIS, vincent calcagno
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引用次数: 0

摘要

动物的运动和行为是理解生态和进化过程的关键。近年来,在动物行为表型的视频跟踪解决方案的方法和技术创新有所增加。尽管这些进步能够收集描述多个个体运动的高分辨率数据,但由于其复杂性、异质性和噪声,分析和解释这些数据仍然具有挑战性。在这里,我们介绍MoveR,这是一个R包,用于导入、过滤、可视化和分析来自常见视频跟踪解决方案的数据。MoveR包括灵活的工具,用于抛光数据,去除跟踪工件,子集和绘制单个路径,以及计算不同的运动和行为指标。
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MoveR: an R package for easy processing and analysis of animal video-tracking data
Animal movement and behavior are critical to understanding ecological and evolutionary processes. Recent years have witnessed an increase in methodological and technological innovations in video-tracking solutions for phenotyping animal behavior. Although these advances enable the collection of high-resolution data describing the movement of multiple individuals, analyzing and interpreting them remains challenging due to their complexity, heterogeneity, and noisiness. Here, we introduce MoveR, an R package for importing, filtering, visualizing, and analyzing data from common video-tracking solutions. MoveR includes flexible tools for polishing data, removing tracking artifacts, subsetting and plotting individual paths, and computing different movement and behavior metrics.
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