n -烯丙基- n -乙基甲酰胺的合成和光谱研究:DFT的计算方面,分子对接和药物相似性分析

IF 1.6 4区 化学 Q4 CHEMISTRY, PHYSICAL Molecular Physics Pub Date : 2023-10-10 DOI:10.1080/00268976.2023.2264399
M. Lawrence, P. Rajesh, M. Vimala, R. Girija, S. Sahaya Jude Dhas
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引用次数: 0

摘要

摘要本文对n -烯丙基- n -乙基甲酰胺(NAEF)的分子结构和振动谱进行了实验和理论的综合研究。利用B3LYP方法和基集6-311++G (d,p),利用密度泛函理论(DFT)计算研究了目标分子n -烯丙基- n -乙基甲酰胺(NAEF)。计算了NAEF的几何参数和结构,得到了全局描述符和反应位点。Frontier对分子轨道能量的分析表明,分子的电荷交换相当高。计算了n-烯丙基- n-乙基甲酰胺(NAEF)的非线性光学性质,并与标准材料尿素进行了比较。分析了可能存在的官能团的振动赋值,并将其制表。计算了不同温度下的热力学函数,并列出了相应的表。核磁共振波谱和量子计算化学方法已被用于了解NAEF的结构。此外,不同的技术,如拓扑分析和药物相似性被用来确定NAEF的结构和其他性质。分子对接研究可以确定对接分数最高(结合能最低)和非共价相互作用最多的残基。关键词:密度泛函理论;分子对接;自然键轨道;劳伦斯:概念化,方法论,验证,形式分析,写作-原稿,写作-审查和编辑,可视化。P. Rajesh:调查,监督,项目管理,审查和编辑。M. Vimala:概念化,软件,资源,项目管理,写作-审查和编辑。R. Girija:验证、方法论、资源和写作。S. Sahaya Jude Dhas:概念化,软件,调查,项目管理,写作-审查和编辑。披露声明作者未报告潜在的利益冲突。数据可用性声明数据可应要求提供。
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Synthesis and spectroscopic investigation of N-allyl-N-ethylformamide: computational aspects of DFT, molecular docking and drug-likeness analyses
AbstractThe present work deals with the understanding of the integrated experimental and theoretical study of the molecular structure and vibrational spectra of N-allyl-N-ethylformamide (NAEF). Density functional theory (DFT) calculations were used to study the subject molecule, N-allyl-N-ethylformamide (NAEF), utilising the B3LYP method and the basis set 6-311++G (d,p). Geometrical parameters and the structure of NAEF were computed such that global descriptors and reactive sites were obtained. Frontier’s analysis of molecular orbital energy demonstrates that the molecule’s charge exchange is considerably high. Non-linear optical properties of N-allyl-N-ethylformamide (NAEF) were computed and compared with the standard material of urea. The vibrational assignments were analysed for the existence of the probable functional groups and tabulated. The thermodynamic functions were computed at different temperatures and listed accordingly. NMR spectroscopy and quantum computational chemistry methods have been employed for the understanding of the structures of NAEF. Moreover, different techniques such as topological analysis and drug-likeness were utilised to determine the structure and other properties of NAEF. The molecular docking study could determine the residue with the highest docking score (lowest binding energy) and the most non-covalent interactions.KEYWORDS: Density functional theorymolecular dockingnatural bond orbitalchromatographyhyperpolarisability CRediT authorship contribution statementM. Lawrence: Conceptualisation, Methodology, Validation, Formal analysis, Writing – original draft, Writing – review & editing, Visualisation. P. Rajesh: Investigation, Supervision, Project administration, review & editing. M. Vimala: Conceptualisation, Software, Resources, Project administration, Writing – review & editing. R. Girija: Validation, Methodology, Resources & writing. S. Sahaya Jude Dhas: Conceptualisation, Software, Investigation, Project administration, Writing – review & editing.Disclosure statementNo potential conflict of interest was reported by the author(s).Data availability statementData will be made available on request.
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来源期刊
Molecular Physics
Molecular Physics 物理-物理:原子、分子和化学物理
CiteScore
3.60
自引率
5.90%
发文量
269
审稿时长
2 months
期刊介绍: Molecular Physics is a well-established international journal publishing original high quality papers in chemical physics and physical chemistry. The journal covers all experimental and theoretical aspects of molecular science, from electronic structure, molecular dynamics, spectroscopy and reaction kinetics to condensed matter, surface science, and statistical mechanics of simple and complex fluids. Contributions include full papers, preliminary communications, research notes and invited topical review articles.
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