{"title":"9-氨基吖啶和苦味酸有机盐晶体的合成、结构表征和DFT计算:9-氨基吖啶苦味酸","authors":"Fatma Aydin, Nahide Burcu Arslan","doi":"10.5155/eurjchem.14.3.376-384.2462","DOIUrl":null,"url":null,"abstract":"Organic salt, 9-aminoacridinium picrate (9-AAcPc), containing equimolar quantities of 9-aminoacridine and picric acid was obtained and a single crystal was grown by the slow evaporation method in the mixture of methanol: tetrahydrofuran solvent (1: 1, v: v). The molecular structure of the prepared compound was confirmed by FT-IR, 1H NMR, and 13C NMR spectroscopic methods, as well as single crystal X-ray diffraction analysis. The X-ray diffraction analysis of the crystal structure of the title compound showed the presence of the triclinic space group P-1 with no. 2, a = 8.2811(7) Å, b = 10.1003(9) Å, c = 13.4484(13) Å, α = 83.521(3)°, β = 83.330(3)°, γ = 66.595(3)°, V = 1022.56(16) Å3, Z = 2, μ(MoKα) = 0.108 mm-1, Dcalc = 1.375 g/cm3, 56338 reflections measured (5.89° ≤ 2Θ ≤ 56.704°), 5097 unique (Rint = 0.0400, Rsigma = 0.0210) which were used in all calculations. The final R1 was 0.0552 (I > 2σ(I)) and wR2 was 0.1757 (all data). The molecular geometry was also optimized using density functional theory. The frontier molecular orbitals were calculated, and we discussed the probability that the proton transfers from the phenolic OH group of picric acid to different nitrogen units. The calculated electronic structure properties of the title molecule, such as the HOMO and LUMO analysis, and different molecular electrostatic potential maps, were obtained by using the density functional theory method, and the calculated structure was compared with the experimental structure. The thermal stability of the crystal was also analyzed using the TGA/DTG technique.","PeriodicalId":11778,"journal":{"name":"European Journal of Chemistry","volume":"1 1","pages":"0"},"PeriodicalIF":0.0000,"publicationDate":"2023-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Synthesis and structural characterization and DFT calculations of the organic salt crystal obtaining 9-aminoacridine and picric acid: 9-Aminoacridinium picrate\",\"authors\":\"Fatma Aydin, Nahide Burcu Arslan\",\"doi\":\"10.5155/eurjchem.14.3.376-384.2462\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Organic salt, 9-aminoacridinium picrate (9-AAcPc), containing equimolar quantities of 9-aminoacridine and picric acid was obtained and a single crystal was grown by the slow evaporation method in the mixture of methanol: tetrahydrofuran solvent (1: 1, v: v). The molecular structure of the prepared compound was confirmed by FT-IR, 1H NMR, and 13C NMR spectroscopic methods, as well as single crystal X-ray diffraction analysis. The X-ray diffraction analysis of the crystal structure of the title compound showed the presence of the triclinic space group P-1 with no. 2, a = 8.2811(7) Å, b = 10.1003(9) Å, c = 13.4484(13) Å, α = 83.521(3)°, β = 83.330(3)°, γ = 66.595(3)°, V = 1022.56(16) Å3, Z = 2, μ(MoKα) = 0.108 mm-1, Dcalc = 1.375 g/cm3, 56338 reflections measured (5.89° ≤ 2Θ ≤ 56.704°), 5097 unique (Rint = 0.0400, Rsigma = 0.0210) which were used in all calculations. The final R1 was 0.0552 (I > 2σ(I)) and wR2 was 0.1757 (all data). The molecular geometry was also optimized using density functional theory. The frontier molecular orbitals were calculated, and we discussed the probability that the proton transfers from the phenolic OH group of picric acid to different nitrogen units. The calculated electronic structure properties of the title molecule, such as the HOMO and LUMO analysis, and different molecular electrostatic potential maps, were obtained by using the density functional theory method, and the calculated structure was compared with the experimental structure. The thermal stability of the crystal was also analyzed using the TGA/DTG technique.\",\"PeriodicalId\":11778,\"journal\":{\"name\":\"European Journal of Chemistry\",\"volume\":\"1 1\",\"pages\":\"0\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-09-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"European Journal of Chemistry\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.5155/eurjchem.14.3.376-384.2462\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"European Journal of Chemistry","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.5155/eurjchem.14.3.376-384.2462","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
以甲醇:四氢呋喃(1:1,v: v)为溶剂,采用慢蒸发法制备了9-氨基吖啶酸苦味酸(9-AAcPc)有机盐,并通过FT-IR、1H NMR和13C NMR波谱法以及单晶x射线衍射分析证实了所制化合物的分子结构。对标题化合物的晶体结构进行了x射线衍射分析,结果表明该化合物存在P-1三斜空间群。2, a = 8.2811(7) Å, b = 10.1003(9) Å, c = 13.4484(13) Å, α = 83.521(3)°,β = 83.330(3)°,γ = 66.595(3)°,V = 1022.56(16) Å3, Z = 2, μ(MoKα) = 0.108 mm-1, Dcalc = 1.375 g/cm3,测量反射56338(5.89°≤2Θ≤56.704°),unique 5097 (Rint = 0.0400, Rsigma = 0.0210),用于所有计算。最终R1为0.0552 (I >2σ(I)), wR2为0.1757(所有数据)。利用密度泛函理论对分子几何结构进行了优化。计算了分子前沿轨道,讨论了质子从苦味酸酚羟基转移到不同氮基的概率。利用密度泛函理论方法得到了标题分子的计算电子结构性质,如HOMO和LUMO分析,以及不同的分子静电势图,并将计算结构与实验结构进行了比较。并用TGA/DTG技术分析了晶体的热稳定性。
Synthesis and structural characterization and DFT calculations of the organic salt crystal obtaining 9-aminoacridine and picric acid: 9-Aminoacridinium picrate
Organic salt, 9-aminoacridinium picrate (9-AAcPc), containing equimolar quantities of 9-aminoacridine and picric acid was obtained and a single crystal was grown by the slow evaporation method in the mixture of methanol: tetrahydrofuran solvent (1: 1, v: v). The molecular structure of the prepared compound was confirmed by FT-IR, 1H NMR, and 13C NMR spectroscopic methods, as well as single crystal X-ray diffraction analysis. The X-ray diffraction analysis of the crystal structure of the title compound showed the presence of the triclinic space group P-1 with no. 2, a = 8.2811(7) Å, b = 10.1003(9) Å, c = 13.4484(13) Å, α = 83.521(3)°, β = 83.330(3)°, γ = 66.595(3)°, V = 1022.56(16) Å3, Z = 2, μ(MoKα) = 0.108 mm-1, Dcalc = 1.375 g/cm3, 56338 reflections measured (5.89° ≤ 2Θ ≤ 56.704°), 5097 unique (Rint = 0.0400, Rsigma = 0.0210) which were used in all calculations. The final R1 was 0.0552 (I > 2σ(I)) and wR2 was 0.1757 (all data). The molecular geometry was also optimized using density functional theory. The frontier molecular orbitals were calculated, and we discussed the probability that the proton transfers from the phenolic OH group of picric acid to different nitrogen units. The calculated electronic structure properties of the title molecule, such as the HOMO and LUMO analysis, and different molecular electrostatic potential maps, were obtained by using the density functional theory method, and the calculated structure was compared with the experimental structure. The thermal stability of the crystal was also analyzed using the TGA/DTG technique.