WILMER LEAL, GUILLERMO RESTREPO, PETER F. STADLER, JÜRGEN JOST
{"title":"超图的Forman-ricci曲率","authors":"WILMER LEAL, GUILLERMO RESTREPO, PETER F. STADLER, JÜRGEN JOST","doi":"10.1142/s021952592150003x","DOIUrl":null,"url":null,"abstract":"Hypergraphs serve as models of complex networks that capture more general structures than binary relations. For graphs, a wide array of statistics has been devised to gauge different aspects of their structures. Hypergraphs lack behind in this respect. The Forman–Ricci curvature is a statistics for graphs based on Riemannian geometry, which stresses the relational character of vertices in a network by focusing on the edges rather than on the vertices. Despite many successful applications of this measure to graphs, Forman–Ricci curvature has not been introduced for hypergraphs. Here, we define the Forman–Ricci curvature for directed and undirected hypergraphs such that the curvature for graphs is recovered as a special case. It quantifies the trade-off between hyperedge (arc) size and the degree of participation of hyperedge (arc) vertices in other hyperedges (arcs). Here, we determine upper and lower bounds for Forman–Ricci curvature both for hypergraphs in general and for graphs in particular. The measure is then applied to two large networks: the Wikipedia vote network and the metabolic network of the bacterium <italic>Escherichia coli</italic>. In the first case, the curvature is governed by the size of the hyperedges, while in the second example, it is dominated by the hyperedge degree. We found that the number of users involved in Wikipedia elections goes hand-in-hand with the participation of experienced users. The curvature values of the metabolic network allowed detecting redundant and bottle neck reactions. It is found that ADP phosphorylation is the metabolic bottle neck reaction but that the reverse reaction is not similarly central for the metabolism. Furthermore, we show the utility of the Forman–Ricci curvature for quantification of assortativity in hypergraphs and illustrate the idea by investigating three metabolic networks.","PeriodicalId":50871,"journal":{"name":"Advances in Complex Systems","volume":"325 1","pages":""},"PeriodicalIF":0.7000,"publicationDate":"2021-09-30","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"FORMAN–RICCI CURVATURE FOR HYPERGRAPHS\",\"authors\":\"WILMER LEAL, GUILLERMO RESTREPO, PETER F. STADLER, JÜRGEN JOST\",\"doi\":\"10.1142/s021952592150003x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Hypergraphs serve as models of complex networks that capture more general structures than binary relations. For graphs, a wide array of statistics has been devised to gauge different aspects of their structures. Hypergraphs lack behind in this respect. The Forman–Ricci curvature is a statistics for graphs based on Riemannian geometry, which stresses the relational character of vertices in a network by focusing on the edges rather than on the vertices. Despite many successful applications of this measure to graphs, Forman–Ricci curvature has not been introduced for hypergraphs. Here, we define the Forman–Ricci curvature for directed and undirected hypergraphs such that the curvature for graphs is recovered as a special case. It quantifies the trade-off between hyperedge (arc) size and the degree of participation of hyperedge (arc) vertices in other hyperedges (arcs). Here, we determine upper and lower bounds for Forman–Ricci curvature both for hypergraphs in general and for graphs in particular. The measure is then applied to two large networks: the Wikipedia vote network and the metabolic network of the bacterium <italic>Escherichia coli</italic>. In the first case, the curvature is governed by the size of the hyperedges, while in the second example, it is dominated by the hyperedge degree. We found that the number of users involved in Wikipedia elections goes hand-in-hand with the participation of experienced users. The curvature values of the metabolic network allowed detecting redundant and bottle neck reactions. It is found that ADP phosphorylation is the metabolic bottle neck reaction but that the reverse reaction is not similarly central for the metabolism. Furthermore, we show the utility of the Forman–Ricci curvature for quantification of assortativity in hypergraphs and illustrate the idea by investigating three metabolic networks.\",\"PeriodicalId\":50871,\"journal\":{\"name\":\"Advances in Complex Systems\",\"volume\":\"325 1\",\"pages\":\"\"},\"PeriodicalIF\":0.7000,\"publicationDate\":\"2021-09-30\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Advances in Complex Systems\",\"FirstCategoryId\":\"100\",\"ListUrlMain\":\"https://doi.org/10.1142/s021952592150003x\",\"RegionNum\":4,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MATHEMATICS, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Advances in Complex Systems","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1142/s021952592150003x","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MATHEMATICS, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
Hypergraphs serve as models of complex networks that capture more general structures than binary relations. For graphs, a wide array of statistics has been devised to gauge different aspects of their structures. Hypergraphs lack behind in this respect. The Forman–Ricci curvature is a statistics for graphs based on Riemannian geometry, which stresses the relational character of vertices in a network by focusing on the edges rather than on the vertices. Despite many successful applications of this measure to graphs, Forman–Ricci curvature has not been introduced for hypergraphs. Here, we define the Forman–Ricci curvature for directed and undirected hypergraphs such that the curvature for graphs is recovered as a special case. It quantifies the trade-off between hyperedge (arc) size and the degree of participation of hyperedge (arc) vertices in other hyperedges (arcs). Here, we determine upper and lower bounds for Forman–Ricci curvature both for hypergraphs in general and for graphs in particular. The measure is then applied to two large networks: the Wikipedia vote network and the metabolic network of the bacterium Escherichia coli. In the first case, the curvature is governed by the size of the hyperedges, while in the second example, it is dominated by the hyperedge degree. We found that the number of users involved in Wikipedia elections goes hand-in-hand with the participation of experienced users. The curvature values of the metabolic network allowed detecting redundant and bottle neck reactions. It is found that ADP phosphorylation is the metabolic bottle neck reaction but that the reverse reaction is not similarly central for the metabolism. Furthermore, we show the utility of the Forman–Ricci curvature for quantification of assortativity in hypergraphs and illustrate the idea by investigating three metabolic networks.
期刊介绍:
Advances in Complex Systems aims to provide a unique medium of communication for multidisciplinary approaches, either empirical or theoretical, to the study of complex systems. The latter are seen as systems comprised of multiple interacting components, or agents. Nonlinear feedback processes, stochastic influences, specific conditions for the supply of energy, matter, or information may lead to the emergence of new system qualities on the macroscopic scale that cannot be reduced to the dynamics of the agents. Quantitative approaches to the dynamics of complex systems have to consider a broad range of concepts, from analytical tools, statistical methods and computer simulations to distributed problem solving, learning and adaptation. This is an interdisciplinary enterprise.