{"title":"双聚类分析与可视化方法综述","authors":"Melih Sozdinler","doi":"arxiv-2111.12154","DOIUrl":null,"url":null,"abstract":"Recently, biclustering is one of the hot topics in bioinformatics and takes\nthe attention of authors from several different disciplines. Hence, many\ndifferent methodologies from a variety of disciplines are proposed as a\nsolution to the biclustering problem. As a consequence of this issue, a variety\nof solutions makes it harder to evaluate the proposed methods. With this review\npaper, we are aimed to discuss both analysis and visualization of biclustering\nas a guide for the comparisons between brand new and existing biclustering\nalgorithms. Additionally, we concentrate on the tools that provide\nvisualizations with accompanied analysis techniques. Through the paper, we give\nseveral references that are also a short review of the state of the art for the\nones who will pursue research on biclustering. The Paper outline is as follows;\nwe first give the visualization and analysis methods, then we evaluate each\nproposed tool with the visualization contribution and analysis options,\nfinally, we discuss future directions for biclustering and we propose standards\nfor future work.","PeriodicalId":501533,"journal":{"name":"arXiv - CS - General Literature","volume":"64 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-11-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A Review on Analysis and Visualization Methods for Biclustering\",\"authors\":\"Melih Sozdinler\",\"doi\":\"arxiv-2111.12154\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Recently, biclustering is one of the hot topics in bioinformatics and takes\\nthe attention of authors from several different disciplines. Hence, many\\ndifferent methodologies from a variety of disciplines are proposed as a\\nsolution to the biclustering problem. As a consequence of this issue, a variety\\nof solutions makes it harder to evaluate the proposed methods. With this review\\npaper, we are aimed to discuss both analysis and visualization of biclustering\\nas a guide for the comparisons between brand new and existing biclustering\\nalgorithms. Additionally, we concentrate on the tools that provide\\nvisualizations with accompanied analysis techniques. Through the paper, we give\\nseveral references that are also a short review of the state of the art for the\\nones who will pursue research on biclustering. The Paper outline is as follows;\\nwe first give the visualization and analysis methods, then we evaluate each\\nproposed tool with the visualization contribution and analysis options,\\nfinally, we discuss future directions for biclustering and we propose standards\\nfor future work.\",\"PeriodicalId\":501533,\"journal\":{\"name\":\"arXiv - CS - General Literature\",\"volume\":\"64 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2021-11-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - CS - General Literature\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2111.12154\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - CS - General Literature","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2111.12154","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
A Review on Analysis and Visualization Methods for Biclustering
Recently, biclustering is one of the hot topics in bioinformatics and takes
the attention of authors from several different disciplines. Hence, many
different methodologies from a variety of disciplines are proposed as a
solution to the biclustering problem. As a consequence of this issue, a variety
of solutions makes it harder to evaluate the proposed methods. With this review
paper, we are aimed to discuss both analysis and visualization of biclustering
as a guide for the comparisons between brand new and existing biclustering
algorithms. Additionally, we concentrate on the tools that provide
visualizations with accompanied analysis techniques. Through the paper, we give
several references that are also a short review of the state of the art for the
ones who will pursue research on biclustering. The Paper outline is as follows;
we first give the visualization and analysis methods, then we evaluate each
proposed tool with the visualization contribution and analysis options,
finally, we discuss future directions for biclustering and we propose standards
for future work.