黑腹果蝇(双翅目:果蝇科)抗干燥性的遗传基础和可重复性

IF 1.3 4区 生物学 Q4 GENETICS & HEREDITY Genetica Pub Date : 2023-12-16 DOI:10.1007/s10709-023-00201-0
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引用次数: 0

摘要

摘要 脱水是居住在缺水自然栖息地的生物面临的一个压力因素。因此,面对干旱环境的物种可能会发展出最大限度地抵抗脱水的机制。昆虫是研究脱水影响以及防止水分流失的机制和过程的极佳模型,因为与大型动物相比,昆虫的面积/体积比更大,因此干燥的影响也更大。尽管人们正在了解应对干燥的生理和行为机制,但与抗干燥能力差异和环境依赖效应相关的机制的遗传基础仍未解决。在这里,我们分析了黑腹果蝇抗干燥性的遗传基础,并确定了导致性状变异的候选基因。我们对干燥抗性的定量遗传分析表明了其性双态性和广泛的遗传变异。表型-基因型关联分析(GWAS)确定了71个候选基因,这些候选基因导致了干燥抗性的总表型变异。这些候选基因中有一半具有性别特异性,这表明这一适应性性状的遗传结构在雌雄之间存在差异。此外,我们还公开了在不同实验室对相同品系进行分析的干燥数据,这使我们能够研究独立筛选结果的可靠性和可重复性。我们的调查表明,微环境对实验室的影响是普遍存在的,因为我们在不同实验室发现的影响抗干燥性的基因集中没有发现重叠。
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Genetic basis and repeatability for desiccation resistance in Drosophila melanogaster (Diptera: Drosophilidae)

Abstract

Dehydration is a stress factor for organisms inhabiting natural habitats where water is scarce. Thus, it may be expected that species facing arid environments will develop mechanisms that maximize resistance to desiccation. Insects are excellent models for studying the effects of dehydration as well as the mechanisms and processes that prevent water loss since the effect of desiccation is greater due to the higher area/volume ratio than larger animals. Even though physiological and behavioral mechanisms to cope with desiccation are being understood, the genetic basis underlying the mechanisms related to variation in desiccation resistance and the context-dependent effect remain unsolved. Here we analyze the genetic bases of desiccation resistance in Drosophila melanogaster and identify candidate genes that underlie trait variation. Our quantitative genetic analysis of desiccation resistance revealed sexual dimorphism and extensive genetic variation. The phenotype-genotype association analyses (GWAS) identified 71 candidate genes responsible for total phenotypic variation in desiccation resistance. Half of these candidate genes were sex-specific suggesting that the genetic architecture underlying this adaptive trait differs between males and females. Moreover, the public availability of desiccation data analyzed on the same lines but in a different lab allows us to investigate the reliability and repeatability of results obtained in independent screens. Our survey indicates a pervasive micro-environment lab-dependent effect since we did not detect overlap in the sets of genes affecting desiccation resistance identified between labs.

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来源期刊
Genetica
Genetica 生物-遗传学
CiteScore
2.70
自引率
0.00%
发文量
32
审稿时长
>12 weeks
期刊介绍: Genetica publishes papers dealing with genetics, genomics, and evolution. Our journal covers novel advances in the fields of genomics, conservation genetics, genotype-phenotype interactions, evo-devo, population and quantitative genetics, and biodiversity. Genetica publishes original research articles addressing novel conceptual, experimental, and theoretical issues in these areas, whatever the taxon considered. Biomedical papers and papers on breeding animal and plant genetics are not within the scope of Genetica, unless framed in an evolutionary context. Recent advances in genetics, genomics and evolution are also published in thematic issues and synthesis papers published by experts in the field.
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