来自 Cronartium ribicola 的霉菌寄生虫 Pestalotiopsis sp.

Polish journal of microbiology Pub Date : 2023-12-16 eCollection Date: 2023-12-01 DOI:10.33073/pjm-2023-041
Jinde Yu, Lei Kong, Shichang Fan, Mingjiao Li, Jing Li
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引用次数: 0

摘要

Pestalotiopsis sp. 菌株 cr013 是 Cronartium ribicola 的寄生菌,Cronartium ribicola 是一种潜在的生物防治真菌,可防治阿曼松(Pinus armandii)水泡锈病。先前的一项研究表明,cr013 菌株具有产生新化合物的巨大潜力。本研究利用 BGISEQ-500 和 Oxford Nanopore GridION X5 测序平台对 cr013 菌株分离物进行测序,并对读数进行组装,以获得完整的基因组。我们首先报告了真菌寄生虫 Pestalotiopsis sp:JACFXT010000000, BioProject ID:PRJNA647543, BioSample ID: SAMN15589943),并分析了与寄生过程相关的基因组成分和基因功能。该研究为理解真菌寄生虫Pestalotiopsis sp.的生活策略提供了理论依据,并揭示了菌株cr013次生代谢物多样性的内在机制。
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Genomic Characterization of the Mycoparasite Pestalotiopsis sp. Strain cr013 from Cronartium ribicola.

The Pestalotiopsis sp. strain cr013 is a mycoparasite of Cronartium ribicola, a potential biocontrol fungus for Armand pine (Pinus armandii) blister rust. A previous study showed that the strain cr013 has great potential to produce new compounds. However, there has been no report of the whole-genome sequence of the mycoparasite Pestalotiopsis sp. In this study, the BGISEQ-500 and Oxford Nanopore GridION X5 sequencing platforms were used to sequence the strain cr013 isolates and assemble the reads to obtain the complete genome. We first report the whole-genome information of the mycoparasite Pestalotiopsis sp. strain cr013 (GenBank accession number: JACFXT010000000, BioProject ID: PRJNA647543, BioSample ID: SAMN15589943), and the genomic components and gene functions related to the mycoparasitism process were analyzed. This study provides a theoretical basis for understanding the lifestyle strategy of the mycoparasite Pestalotiopsis sp. and reveals the mechanisms underlying secondary metabolite diversity in the strain cr013.

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