{"title":"氧孢镰刀菌硝化酶基因在大肠杆菌中的克隆和异源表达以及在氰化物降解中的评估","authors":"Azamsadat Moosavizadeh , Mostafa Motallebi , Zahra Moghaddassi Jahromi , Lukhanyo Mekuto","doi":"10.1016/j.enzmictec.2023.110389","DOIUrl":null,"url":null,"abstract":"<div><p>Cyanide is widely utilized in the extraction of precious metal extraction even though it has been deemed as the most toxic compound. <em>Fusarium oxysporum</em> has been shown to degrade cyanide through the activity of the Nitrilase enzyme. In this study, the coding sequence of <em>nitrilase</em> gene from <em>F. oxysporum</em> genomic DNA was optimized for cloning and expression in <em>E. coli</em>. The pUC57 containing synthetic optimized <em>nitrilase</em> gene was transferred into <em>E. coli</em> DH5α strain. This <em>nitrilase</em> gene was sub-cloned into pET26b (+) expression vector containing an in-built His-tag at the C-terminal end to facilitate its purification. The recombinant plasmid, pETAM1, was confirmed by PCR, digestion pattern, and sequencing. The recombinant protein was overproduced in <em>E. coli</em> BL21 (DE3). The results of the SDS-PAGE pattern and Western blot analysis confirmed the expression of the expected recombinant protein. For expression optimization of Nitrilase protein, M16 orthogonal experimental design of the Taguchi method was used. The effect of induction time, temperature and IPTG concentration were examined using four levels for each factors. Estimation of the amount of the expressed protein was calculated via densitometry on SDS-PAGE. The enzyme activity and expression in <em>E. coli</em> proved to be successful since there was ammonia production when potassium cyanide and acrylonitrile were used as substrates while the highest enzyme activity of 88% was expressed at 30 °C. The K<sub>m</sub> and V<sub>m</sub> values of the expressed Nitrilase enzyme were determined to be 0.68 mM and 0.48 mM/min respectively.</p></div>","PeriodicalId":11770,"journal":{"name":"Enzyme and Microbial Technology","volume":null,"pages":null},"PeriodicalIF":3.4000,"publicationDate":"2023-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0141022923001977/pdfft?md5=a2b981cfcf24ef4d1b64962f9f0c8fef&pid=1-s2.0-S0141022923001977-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Cloning and heterologous expression of Fusarium oxysporum nitrilase gene in Escherichia coli and evaluation in cyanide degradation\",\"authors\":\"Azamsadat Moosavizadeh , Mostafa Motallebi , Zahra Moghaddassi Jahromi , Lukhanyo Mekuto\",\"doi\":\"10.1016/j.enzmictec.2023.110389\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Cyanide is widely utilized in the extraction of precious metal extraction even though it has been deemed as the most toxic compound. <em>Fusarium oxysporum</em> has been shown to degrade cyanide through the activity of the Nitrilase enzyme. In this study, the coding sequence of <em>nitrilase</em> gene from <em>F. oxysporum</em> genomic DNA was optimized for cloning and expression in <em>E. coli</em>. The pUC57 containing synthetic optimized <em>nitrilase</em> gene was transferred into <em>E. coli</em> DH5α strain. This <em>nitrilase</em> gene was sub-cloned into pET26b (+) expression vector containing an in-built His-tag at the C-terminal end to facilitate its purification. The recombinant plasmid, pETAM1, was confirmed by PCR, digestion pattern, and sequencing. The recombinant protein was overproduced in <em>E. coli</em> BL21 (DE3). The results of the SDS-PAGE pattern and Western blot analysis confirmed the expression of the expected recombinant protein. For expression optimization of Nitrilase protein, M16 orthogonal experimental design of the Taguchi method was used. The effect of induction time, temperature and IPTG concentration were examined using four levels for each factors. Estimation of the amount of the expressed protein was calculated via densitometry on SDS-PAGE. The enzyme activity and expression in <em>E. coli</em> proved to be successful since there was ammonia production when potassium cyanide and acrylonitrile were used as substrates while the highest enzyme activity of 88% was expressed at 30 °C. 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引用次数: 0
摘要
尽管氰化物被认为是毒性最强的化合物,但它仍被广泛用于贵金属的提取。研究表明,氧孢镰刀菌可通过硝化酶的活性降解氰化物。在这项研究中,对来自氧孢镰刀菌基因组 DNA 的硝化酶基因编码序列进行了优化,以便在大肠杆菌中克隆和表达。将含有合成优化硝化酶基因的 pUC57 转入大肠杆菌 DH5α 菌株。将该硝化酶基因子克隆到 pET26b (+) 表达载体中,该载体的 C 端含有一个内置的 His 标记,以方便其纯化。重组质粒 pETAM1 通过 PCR、消化模式和测序得到确认。重组蛋白在大肠杆菌 BL21 (DE3) 中过量产生。SDS-PAGE 图谱和 Western 印迹分析结果证实了预期重组蛋白的表达。为了优化硝化酶蛋白的表达,采用了田口方法的 M16 正交实验设计。对诱导时间、温度和 IPTG 浓度的影响进行了研究,每个因素有四个水平。通过 SDS-PAGE 密度计计算表达蛋白的量。酶的活性和在大肠杆菌中的表达被证明是成功的,因为当使用氰化钾和丙烯腈作为底物时会产生氨,而在 30 °C 时表达的酶活性最高,达到 88%。经测定,所表达的 Nitrilase 酶的 Km 值和 Vm 值分别为 0.68 mM 和 0.48 mM/min。
Cloning and heterologous expression of Fusarium oxysporum nitrilase gene in Escherichia coli and evaluation in cyanide degradation
Cyanide is widely utilized in the extraction of precious metal extraction even though it has been deemed as the most toxic compound. Fusarium oxysporum has been shown to degrade cyanide through the activity of the Nitrilase enzyme. In this study, the coding sequence of nitrilase gene from F. oxysporum genomic DNA was optimized for cloning and expression in E. coli. The pUC57 containing synthetic optimized nitrilase gene was transferred into E. coli DH5α strain. This nitrilase gene was sub-cloned into pET26b (+) expression vector containing an in-built His-tag at the C-terminal end to facilitate its purification. The recombinant plasmid, pETAM1, was confirmed by PCR, digestion pattern, and sequencing. The recombinant protein was overproduced in E. coli BL21 (DE3). The results of the SDS-PAGE pattern and Western blot analysis confirmed the expression of the expected recombinant protein. For expression optimization of Nitrilase protein, M16 orthogonal experimental design of the Taguchi method was used. The effect of induction time, temperature and IPTG concentration were examined using four levels for each factors. Estimation of the amount of the expressed protein was calculated via densitometry on SDS-PAGE. The enzyme activity and expression in E. coli proved to be successful since there was ammonia production when potassium cyanide and acrylonitrile were used as substrates while the highest enzyme activity of 88% was expressed at 30 °C. The Km and Vm values of the expressed Nitrilase enzyme were determined to be 0.68 mM and 0.48 mM/min respectively.
期刊介绍:
Enzyme and Microbial Technology is an international, peer-reviewed journal publishing original research and reviews, of biotechnological significance and novelty, on basic and applied aspects of the science and technology of processes involving the use of enzymes, micro-organisms, animal cells and plant cells.
We especially encourage submissions on:
Biocatalysis and the use of Directed Evolution in Synthetic Biology and Biotechnology
Biotechnological Production of New Bioactive Molecules, Biomaterials, Biopharmaceuticals, and Biofuels
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New Biotechnological Approaches in Genomics, Proteomics and Metabolomics
Metabolic Engineering, Biomolecular Engineering and Nanobiotechnology
Manuscripts which report isolation, purification, immobilization or utilization of organisms or enzymes which are already well-described in the literature are not suitable for publication in EMT, unless their primary purpose is to report significant new findings or approaches which are of broad biotechnological importance. Similarly, manuscripts which report optimization studies on well-established processes are inappropriate. EMT does not accept papers dealing with mathematical modeling unless they report significant, new experimental data.