通过自主研发的多重 InDel 染色体组全面探索中国西北蒙古族的人群特征和遗传背景

IF 1.4 4区 医学 Q3 MEDICINE, LEGAL Forensic Sciences Research Pub Date : 2023-12-21 DOI:10.1093/fsr/owad047
Xuebing Chen, Hui Xu, Wei Cui, Ming Zhao, Bofeng Zhu
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引用次数: 0

摘要

本研究旨在通过自主开发的 43 个常染色体插入/缺失(A-InDel)多态性遗传标记,研究中国西北蒙古族(NCM)的遗传多态性和人群特征。本研究采用 NCM 群体中 288 个无血缘关系的健康个体,通过 PCR 扩增和 InDel 基因分型获得 43 个 A-InDel 的遗传数据。此外,还对 NCM 群体和 27 个参考人群进行了多重法医遗传分析。NCM 组没有偏离哈代-温伯格平衡(HWE)。观察到的杂合度(Ho)值在 0.3128 至 0.5592 之间,NCM 组的综合区分度(CPD)和累积排除概率(CPE)值分别为 0.9999999999999999999877 和 0.999814。法证参数表明,该面板在 NCM 组中具有多态性和信息量,可作为法证个人身份鉴定的有效补充工具。此外,NCM 群体与 27 个参照人群之间的配对遗传距离、主成分分析、多维尺度分析、系统发生树构建和掺杂分析结果显示,NCM 群体与东亚人群,尤其是来自中国西北部的中国回族群体(CHH)之间存在密切的遗传关系,这与地理位置相符。这些发现有助于对 NCM 群体遗传结构的不断探索和深入了解。
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Comprehensive explorations of population characteristics and genetic background of the Chinese Mongolian group from Northwest China via a self-developed multiplex InDel panel
This study aimed to investigate the genetic polymorphisms and population characteristics of the Mongolian group from northwest China (NCM) through the self-developed panel of 43 autosomal insertion/deletion (A-InDel) polymorphism genetic markers. Herein, 288 unrelated healthy individuals from the NCM group were employed to obtain the genetic data of 43 A-InDels through PCR amplification and InDel genotyping. In addition, multiplex forensic genetic analyses were performed between the NCM group and 27 reference populations. There were no deviations from Hardy–Weinberg equilibrium (HWE) in the NCM group. The observed heterozygosity (Ho) value ranged from 0.3128 to 0.5592, and the combined power of discrimination (CPD) and the cumulative probability of exclusion (CPE) values were 0.9999999999999999999877 and 0.999814, respectively, in the NCM group. Forensic parameters indicate that this panel is polymorphic and informative in the NCM group and can be used as an effective complementary tool for forensic personal identification. Furthermore, the results of pairwise genetic distance, principal component analysis, multidimensional scaling analysis, phylogenetic tree construction, and admixture analysis between the NCM group and 27 reference populations reveal that there is a close genetic relationship between the NCM group and East Asian populations, especially the Chinese Hui group (CHH) group from the northwest China, consistent with the geographical location. These findings contribute to the ongoing genetic exploration and insights into the genetic architecture of the NCM group.
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来源期刊
Forensic Sciences Research
Forensic Sciences Research MEDICINE, LEGAL-
CiteScore
3.60
自引率
7.70%
发文量
158
审稿时长
26 weeks
期刊最新文献
Correction to: Forensic efficiency and population genetic construction of Guizhou Gelao minority from Southwest China revealed by a panel of 23 autosomal STR loci. Correction to: Metric analysis of the patella for sex estimation in a Portuguese sample. Correction to: Forensic features and phylogenetic structure survey of four populations from southwest China via the autosomal insertion/deletion markers. Correction to: Potential role of the sella turcica X-ray imaging aspects for sex estimation in the field of forensic anthropology: a systematic review and meta-analysis. Forensic identification in a multidisciplinary perspective focusing on big challenges.
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