肿瘤坏死因子α诱导蛋白6(TNFAIP6)在肿瘤中的作用:泛癌症分析

Yang Yang, Zhi-Gang Liu, Yan-Qi Yang, Zhi-Gang Zhang, Xiao-Li Wang, Yu-Long Li, Rui-Fang Sun
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引用次数: 0

摘要

越来越多的证据表明,名为肿瘤坏死因子α诱导蛋白6(TNFAIP6)的基因在各种肿瘤中起着重要作用。然而,目前还缺乏对 TNFAIP6 的系统性泛癌分析。在此,我们旨在分析 TNFAIP6 在多种癌症中的表达,并验证其在结肠癌进展过程中的表达。 我们进行了全面的生物信息学分析,研究了 TNFAIP6 在 27 种肿瘤类型中的表达情况。GEPIA2用于评估TNFAIP6对临床癌症预后的影响,cBioportal用于评估TNFAIP6突变。TIMER2.0探讨了TNFAIP6与癌症免疫浸润之间的相关性。CancerSEA 数据库用于对 TNFAIP6 进行功能分析。Metascape 用于识别 TNFAIP6 相关基因的富集通路。免疫组化法检测结肠癌中 TNFAIP6 蛋白的表达。此外,我们还在比较毒物基因组学数据库(Comparative Toxicogenomics Database)中搜索了可能与 TNFAIP6 相关的已知和可能的抗肿瘤药物。 我们发现,在本次分析所涉及的大多数癌症中,TNFAIP6都高度表达,而且TNFAIP6的表达与癌症预后有明显的关系。TNFAIP6 的表达与癌症相关成纤维细胞、中性粒细胞和内皮细胞有关。TNFAIP6和类似基因也可能参与了PID_VEGF_VEGFR_通路。免疫组化显示,TNFAIP6 蛋白在正常组织、腺瘤和结肠癌组织中的表达呈上升趋势。比较毒物基因组学数据库(Comparative Toxicogenomics Database)中发现了几种已知和可能与 TNFAIP6 相关的抗肿瘤药物。这些结果表明,在癌症治疗过程中,一些药物可能以 TNFAIP6 为靶点,包括顺铂、伊立替康、白藜芦醇、U 0126、NSC689534、染料木素、NSC668394、奥沙利铂、plerixafor、托泊替康、长春新碱、氟他胺、多柔比星、MRK 003、叶酸、去甲斑蝥素、曲卡霉素、唑来膦酸和五味子苷 B。 TNFAIP6可能在某些癌症中充当致癌基因。此外,本研究还提供了证据,证明 TNFAIP6 是结肠癌进展的一个重要因素。
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Role of tumor necrosis factor alpha-induced protein 6 (TNFAIP6) in tumors: A pan-cancer analysis
There is growing evidence that the gene named tumor necrosis factor α–induced protein 6 (TNFAIP6) has an important role in various tumors. However, a systematic pan-cancer analysis of TNFAIP6 is lacking. Here we aimed to analyze the expression of TNFAIP6 across multiple cancers and verify its expression during the progression of colon cancer. We performed a comprehensive bioinformatics analysis to examine the expression of TNFAIP6 across 27 tumor types. GEPIA2 was used to evaluate the effect of TNFAIP6 on clinical cancer prognosis. cBioportal was used to assess TNFAIP6 mutations. The correlation between TNFAIP6 and cancer immune infiltrates was explored using TIMER2.0. The CancerSEA database was used to perform functional analysis of TNFAIP6. Metascape was used to identify TNFAIP6-related gene enrichment pathways. Immunohistochemistry was performed to detect TNFAIP6 protein expression in the colon cancer. In addition, the Comparative Toxicogenomics Database was searched for known and possible antitumor drugs that may be associated with TNFAIP6. We found that, in most of the cancers included in this analysis, TNFAIP6 was highly expressed, and there is a distinct relationship between TNFAIP6 expression and cancer prognosis. TNFAIP6 expression is associated with cancer-associated fibroblasts, neutrophils, and endothelial cells. TNFAIP6 and similar genes may also be involved in the PID_VEGF_VEGFR_ pathway. Immunohistochemistry revealed an increasing trend of TNFAIP6 protein expression in normal, adenoma, and colon cancer tissues. Several known and possible antitumor drugs that may be associated with TNFAIP6 were identified in the Comparative Toxicogenomics Database. These results suggest that a number of drugs may target TNFAIP6 during cancer treatment, including cisplatin, irinotecan, resveratrol, U 0126, NSC689534, genistein, NSC668394, oxaliplatin, plerixafor, topotecan, vincristine, flutamide, doxorubicin, MRK 003, folic acid, demecolcine, tunicamycin, zoledronic acid, and schizandrin B. TNFAIP6 may function as an oncogene in certain cancers. Furthermore, this study provides evidence that TNFAIP6 is an important factor in colon cancer progression.
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