{"title":"评估重组表达还原脱卤酶的替代宿主","authors":"Rabeya Rahmatullah, Christopher P. Marquis","doi":"10.1016/j.enzmictec.2023.110390","DOIUrl":null,"url":null,"abstract":"<div><p>Organohalides are recalcitrant, toxic environmental pollutants. Reductive dehalogenase enzymes (RDases) found in organohalide respiring bacteria (OHRB) utilise organohalides as electron acceptors for cellular energy and growth, producing lesser-halogenated compounds. Consequently, microbial reductive dehalogenation via organohalide respiration represents a promising solution for clean-up of organohalide pollutants. <em>Dehalobacter</em> sp. UNSWDHB is an OHRB capable of respiring highly toxic chloroform (CF) and converting it to dichloromethane (DCM). TmrA has been identified as an RDase responsible for this conversion and different strategies for generation of functional recombinant TmrA is the focus of this article. In this study, TmrA was recovered from inclusion bodies expressed in <em>E. coli</em> and refolded in the presence of FeCl<sub>3</sub>, Na<sub>2</sub>S and cobalamin to yield functional enzyme. TmrA has been previously expressed in a soluble and functional form in the corrinoid-producing <em>Bacillus megaterium</em>. Using a fractional experimental design for cultivation and induction combined with purification under anaerobic conditions resulted in substantially higher activity of recombinant and native TmrA than previously reported. TmrA was then expressed in a soluble and active form in <em>Shimwellia blattae.</em> Co-expression with two different putative chaperone proteins from the original host did not increase the level of soluble expression in <em>S. blattae</em>, however activity assays showed that removing the TAT signal from TmrA increases the dechlorination activity compared to when the TAT signal is present. Finally, TmrA was successfully expressed in a soluble and active form in the H<sub>2</sub>-oxidizing <em>C. necator</em> H16, a novel host for the expression of RDases.</p></div>","PeriodicalId":11770,"journal":{"name":"Enzyme and Microbial Technology","volume":null,"pages":null},"PeriodicalIF":3.4000,"publicationDate":"2023-12-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0141022923001989/pdfft?md5=906170bb18c03e411260ac2a88f5f4d7&pid=1-s2.0-S0141022923001989-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Evaluation of alternate hosts for recombinant expression of a reductive dehalogenase\",\"authors\":\"Rabeya Rahmatullah, Christopher P. Marquis\",\"doi\":\"10.1016/j.enzmictec.2023.110390\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Organohalides are recalcitrant, toxic environmental pollutants. Reductive dehalogenase enzymes (RDases) found in organohalide respiring bacteria (OHRB) utilise organohalides as electron acceptors for cellular energy and growth, producing lesser-halogenated compounds. Consequently, microbial reductive dehalogenation via organohalide respiration represents a promising solution for clean-up of organohalide pollutants. <em>Dehalobacter</em> sp. UNSWDHB is an OHRB capable of respiring highly toxic chloroform (CF) and converting it to dichloromethane (DCM). TmrA has been identified as an RDase responsible for this conversion and different strategies for generation of functional recombinant TmrA is the focus of this article. In this study, TmrA was recovered from inclusion bodies expressed in <em>E. coli</em> and refolded in the presence of FeCl<sub>3</sub>, Na<sub>2</sub>S and cobalamin to yield functional enzyme. TmrA has been previously expressed in a soluble and functional form in the corrinoid-producing <em>Bacillus megaterium</em>. 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引用次数: 0
摘要
有机卤化物是难降解的有毒环境污染物。有机卤化物呼吸细菌(OHRB)中的还原脱卤酶(RDases)利用有机卤化物作为细胞能量和生长的电子受体,产生卤素含量较低的化合物。因此,通过有机卤化物呼吸进行微生物还原脱卤是净化有机卤化物污染物的一个很有前景的解决方案。Dehalobacter sp. UNSWDHB 是一种能够呼吸剧毒氯仿(CF)并将其转化为二氯甲烷(DCM)的 OHRB。TmrA 已被确定为负责这种转化的 RD 酶,本文的重点是采用不同的策略生成功能性重组 TmrA。在本研究中,从大肠杆菌表达的包涵体中回收了 TmrA,并在 FeCl3、Na2S 和钴胺素存在下重新折叠,以产生功能性酶。TmrA 以前曾以可溶性和功能性形式在产生珊瑚酸的巨型芽孢杆菌中表达过。在厌氧条件下,采用分段实验设计进行培养和诱导,并结合纯化,重组和原生 TmrA 的活性大大高于之前的报道。然后,TmrA 以可溶的活性形式在白头翁中表达。与来自原宿主的两种不同的假定伴侣蛋白共同表达并没有提高 TmrA 在 S. blattae 中的可溶性表达水平,但活性测定显示,与存在 TAT 信号时相比,去除 TmrA 中的 TAT 信号会提高其脱氯活性。最后,TmrA 成功地以可溶性活性形式在 H2- 氧化的 C. necator H16(一种表达 RDases 的新型宿主)中表达。
Evaluation of alternate hosts for recombinant expression of a reductive dehalogenase
Organohalides are recalcitrant, toxic environmental pollutants. Reductive dehalogenase enzymes (RDases) found in organohalide respiring bacteria (OHRB) utilise organohalides as electron acceptors for cellular energy and growth, producing lesser-halogenated compounds. Consequently, microbial reductive dehalogenation via organohalide respiration represents a promising solution for clean-up of organohalide pollutants. Dehalobacter sp. UNSWDHB is an OHRB capable of respiring highly toxic chloroform (CF) and converting it to dichloromethane (DCM). TmrA has been identified as an RDase responsible for this conversion and different strategies for generation of functional recombinant TmrA is the focus of this article. In this study, TmrA was recovered from inclusion bodies expressed in E. coli and refolded in the presence of FeCl3, Na2S and cobalamin to yield functional enzyme. TmrA has been previously expressed in a soluble and functional form in the corrinoid-producing Bacillus megaterium. Using a fractional experimental design for cultivation and induction combined with purification under anaerobic conditions resulted in substantially higher activity of recombinant and native TmrA than previously reported. TmrA was then expressed in a soluble and active form in Shimwellia blattae. Co-expression with two different putative chaperone proteins from the original host did not increase the level of soluble expression in S. blattae, however activity assays showed that removing the TAT signal from TmrA increases the dechlorination activity compared to when the TAT signal is present. Finally, TmrA was successfully expressed in a soluble and active form in the H2-oxidizing C. necator H16, a novel host for the expression of RDases.
期刊介绍:
Enzyme and Microbial Technology is an international, peer-reviewed journal publishing original research and reviews, of biotechnological significance and novelty, on basic and applied aspects of the science and technology of processes involving the use of enzymes, micro-organisms, animal cells and plant cells.
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Biocatalysis and the use of Directed Evolution in Synthetic Biology and Biotechnology
Biotechnological Production of New Bioactive Molecules, Biomaterials, Biopharmaceuticals, and Biofuels
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New Biotechnological Approaches in Genomics, Proteomics and Metabolomics
Metabolic Engineering, Biomolecular Engineering and Nanobiotechnology
Manuscripts which report isolation, purification, immobilization or utilization of organisms or enzymes which are already well-described in the literature are not suitable for publication in EMT, unless their primary purpose is to report significant new findings or approaches which are of broad biotechnological importance. Similarly, manuscripts which report optimization studies on well-established processes are inappropriate. EMT does not accept papers dealing with mathematical modeling unless they report significant, new experimental data.