瑞士西部视网膜色素变性和其他遗传性视网膜疾病的遗传学。

IF 2 4区 医学 Q2 OPHTHALMOLOGY Ophthalmic Research Pub Date : 2024-01-01 Epub Date: 2023-12-29 DOI:10.1159/000536036
Giovanni Marco Conti, Veronika Vaclavik, Carlo Rivolta, Pascal Escher, Daniel Francis Schorderet, Francis L Munier, Hoai Viet Tran
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引用次数: 0

摘要

导言:遗传性视网膜疾病的基因突变筛查是基因靶向治疗的先决条件。我们的目的是报告和分析瑞士一个中心的遗传性视网膜疾病(IRD)致病基因突变比例,以描述瑞士西部IRD的分布情况:我们对患者记录进行了回顾性研究。纳入标准为:2002 年 1 月至 2022 年 12 月期间,居住在瑞士西部、临床诊断为 IRDs 且已通过洛桑儒勒-戈宁眼科医院(JGEH)遗传学服务部门分子诊断的患者及其亲属。我们首先调查了所有获得临床诊断的患者(完整队列)的 IRD 表型,然后计算了整个队列(基因确定队列)中 IRD 基因突变的分布情况。我们分析了由儿童患者(≤ 18 岁)组成的子群。此外,我们还计算了最具代表性的 IRD 基因突变的分布情况。我们采用不同年代的DNA芯片分析、直接测序和桑格测序相结合的方法进行了全面的基因筛查:整个队列包括来自 690 个家庭的 899 名临床诊断为 IRD 的患者。我们在基因确定的队列中确定了来自 285 个家庭的 400 人,他们的分子诊断均已明确(84 个基因存在变异)。儿科队列包括来自 65 个家庭的 89 名分子诊断明确的患者。基因测定队列的分子诊断率为 58.2%(家族比率),每个家族最常涉及的 5 个基因是 ABCA4(11.6%)、USH2A(7.4%)、EYS(6.7%)、PRPH2(6.3%)和 BEST1(4.6%)。儿科队列的家族分子诊断率为64.4%,每个家族中最常见的5个突变基因是RS1(9.2%)、ABCA4(7.7%)、CNGB3(7.7%)、CACNA1F(6.2%)和CEP290(4.6%):本研究描述了瑞士西部 IRD 的基因突变情况,以量化其疾病负担,并有助于更好地确定未来基因靶向疗法的发展方向。
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Genetics of Retinitis Pigmentosa and Other Hereditary Retinal Disorders in Western Switzerland.

Introduction: Mutational screening of inherited retinal disorders is prerequisite for gene targeted therapy. Our aim was to report and analyze the proportions of mutations in inherited retinal disease (IRD)-causing genes from a single center in Switzerland in order to describe the distribution of IRDs in Western Switzerland.

Methods: We conducted a retrospective study of patient records. Criteria for inclusion were residence in Western Switzerland for patients and relatives presenting a clinical diagnosis of IRDs and an established molecular diagnosis managed by the genetics service of the Jules-Gonin Eye Hospital (JGEH) of Lausanne between January 2002 and December 2022. We initially investigated the IRD phenotypes in all patients (full cohort) with a clinical diagnosis, then calculated the distribution of IRD gene mutations in the entire cohort (genetically determined cohort). We analyzed a sub-group that comprised pediatric patients (≤18 years of age). In addition, we calculated the distribution of gene mutations within the most represented IRDs. Comprehensive gene screening was performed using a combined approach of different generation of DNA microarray analysis, direct sequencing, and Sanger sequencing.

Results: The full cohort comprised 899 individuals from 690 families with a clinical diagnosis of IRDs. We identified 400 individuals from 285 families with an elucidated molecular diagnosis (variants in 84 genes) in the genetically determined cohort. The pediatric cohort included 89 individuals from 65 families with an elucidated molecular diagnosis. The molecular diagnosis rate for the genetically determined cohort was 58.2% (family ratio) and the 5 most frequently implicated genes per family were ABCA4 (11.6%), USH2A (7.4%), EYS (6.7%), PRPH2 (6.3%), and BEST1 (4.6%). The pediatric cohort had a family molecular diagnosis rate of 64.4% and the 5 most common mutated genes per family were RS1 (9.2%), ABCA4 (7.7%), CNGB3 (7.7%), CACNA1F (6.2%), CEP290 (4.6%).

Conclusions: This study describes the genetic mutation landscape of IRDs in Western Switzerland in order to quantify their disease burden and contribute to a better orientation of the development of future gene targeted therapies.

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来源期刊
Ophthalmic Research
Ophthalmic Research 医学-眼科学
CiteScore
3.80
自引率
4.80%
发文量
75
审稿时长
6-12 weeks
期刊介绍: ''Ophthalmic Research'' features original papers and reviews reporting on translational and clinical studies. Authors from throughout the world cover research topics on every field in connection with physical, physiologic, pharmacological, biochemical and molecular biological aspects of ophthalmology. This journal also aims to provide a record of international clinical research for both researchers and clinicians in ophthalmology. Finally, the transfer of information from fundamental research to clinical research and clinical practice is particularly welcome.
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