致毒棒状杆菌的蛋白质组学

IF 4 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Proteomes Pub Date : 2023-12-30 DOI:10.3390/proteomes12010002
A. Burkovski
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引用次数: 0

摘要

在棒状杆菌属中,有 6 个物种可能携带毒性基因,该基因编码强效白喉外毒素:它们是白喉棒状杆菌(Corynebacterium diphtheriae)、白喉棒状杆菌(Corynebacterium belfantii)、溃疡棒状杆菌(Corynebacterium rouxii)、溃疡棒状杆菌(Corynebacterium ulcerans)、假结核棒状杆菌(Corynebacterium pseudotuberculosis)和硅棒状杆菌(Corynebacterium silvaticum)。这些细菌具有感染不同宿主物种的潜力,可导致人类感染、人畜共患病或重要经济动物感染,因此具有很高的科学和经济价值,不同的研究小组已对其进行了蛋白质组分析。这些研究表明,基于 MS 的蛋白质组学与生物信息学工具的结合尤其有助于阐明棒状杆菌基因组的功能方面,并处理基因组和蛋白质组的复杂性。蛋白质组学和生物信息学方法的结合还被用于发现新的疫苗和药物靶点。此外,基质辅助激光解吸/电离飞行时间质谱法已被确定为鉴定这些细菌的快速而精确的工具。
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Proteomics of Toxigenic Corynebacteria
Within the genus Corynebacterium, six species are potential carriers of the tox gene, which encodes the highly potent diphtheria exotoxin: Corynebacterium diphtheriae, Corynebacterium belfantii, Corynebacterium rouxii, Corynebacterium ulcerans, Corynebacterium pseudotuberculosis and Corynebacterium silvaticum. Based on their potential to infect different host species and cause either human infections, zoonotic diseases or infections of economically important animals, these bacteria are of high scientific and economic interest and different research groups have carried out proteome analyses. These showed that especially the combination of MS-based proteomics with bioinformatic tools helped significantly to elucidate the functional aspects of corynebacterial genomes and to handle the genome and proteome complexity. The combination of proteomic and bioinformatic approaches was also used to discover new vaccine and drug targets. In addition, matrix-assisted laser desorption/ionization time-of-flight mass spectrometry has been established as a fast and precise tool for the identification of these bacteria.
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来源期刊
Proteomes
Proteomes Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
6.50
自引率
3.00%
发文量
37
审稿时长
11 weeks
期刊介绍: Proteomes (ISSN 2227-7382) is an open access, peer reviewed journal on all aspects of proteome science. Proteomes covers the multi-disciplinary topics of structural and functional biology, protein chemistry, cell biology, methodology used for protein analysis, including mass spectrometry, protein arrays, bioinformatics, HTS assays, etc. Our aim is to encourage scientists to publish their experimental and theoretical results in as much detail as possible. Therefore, there is no restriction on the length of papers. Scope: -whole proteome analysis of any organism -disease/pharmaceutical studies -comparative proteomics -protein-ligand/protein interactions -structure/functional proteomics -gene expression -methodology -bioinformatics -applications of proteomics
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