{"title":"小角 X 射线散射在结构生物学中的应用","authors":"L. Fan, Yun-Xing Wang","doi":"10.1107/s2053273323098133","DOIUrl":null,"url":null,"abstract":"Small-angle X - ray scattering (SAXS) is a complementary technique to Macromolecular Crystallography, NMR and Cryo -EM techniques and is becoming more widely used in structural biology. Crystallography requires good crystals and NMR has a size limitation. Cryo - EM studies biomolecules under a frozen condition. SAXS, on the other hand, allows for the study of the structure and dynamics of macrobiomolecules and their complexes in solution and under various buffer conditions such as salt concentration, pH, with or without ligand as well as under changing sample environments such as temperature and pressure. SAXS provides insight not only into global information about size and shape of biomacrobiomolecules, but also the information about flexibility and an ensemble of conformers. SAXS data can also be used in tandem with other biophysical methods (including crystallography, NMR, AFM and cryo-EM) by providing additional restraints that further improve simulations, validate structural models as well as fi nd missing fragments. The SAXS Facility of the Natio nal Cancer Institute (NCI) opens to all intramural and extramural research communities. The mission of the SAXS Core Facility is to provide support to the user communities with expertise in experimental design, data collection, processing, analysis, and in terpretation. The research fi eld includes but is not limited to structural studies of nucleic acids, proteins, protein assemblies, virus particles, lipid membranes and membrane-protein/DNA complexes. This presentation gives a brief introduction to the NCI SAXS facility and highlights recent scientific achievements in structural biology produced by NCI SAXS core users. NCI SAXS Core website: https://ccr.cancer.gov/center - for -structural-biology/saxs-core-facility","PeriodicalId":6903,"journal":{"name":"Acta Crystallographica Section A Foundations and Advances","volume":"59 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-07-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Small-angle X-ray scattering applications in structural biology\",\"authors\":\"L. Fan, Yun-Xing Wang\",\"doi\":\"10.1107/s2053273323098133\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Small-angle X - ray scattering (SAXS) is a complementary technique to Macromolecular Crystallography, NMR and Cryo -EM techniques and is becoming more widely used in structural biology. Crystallography requires good crystals and NMR has a size limitation. Cryo - EM studies biomolecules under a frozen condition. SAXS, on the other hand, allows for the study of the structure and dynamics of macrobiomolecules and their complexes in solution and under various buffer conditions such as salt concentration, pH, with or without ligand as well as under changing sample environments such as temperature and pressure. SAXS provides insight not only into global information about size and shape of biomacrobiomolecules, but also the information about flexibility and an ensemble of conformers. SAXS data can also be used in tandem with other biophysical methods (including crystallography, NMR, AFM and cryo-EM) by providing additional restraints that further improve simulations, validate structural models as well as fi nd missing fragments. The SAXS Facility of the Natio nal Cancer Institute (NCI) opens to all intramural and extramural research communities. The mission of the SAXS Core Facility is to provide support to the user communities with expertise in experimental design, data collection, processing, analysis, and in terpretation. The research fi eld includes but is not limited to structural studies of nucleic acids, proteins, protein assemblies, virus particles, lipid membranes and membrane-protein/DNA complexes. This presentation gives a brief introduction to the NCI SAXS facility and highlights recent scientific achievements in structural biology produced by NCI SAXS core users. NCI SAXS Core website: https://ccr.cancer.gov/center - for -structural-biology/saxs-core-facility\",\"PeriodicalId\":6903,\"journal\":{\"name\":\"Acta Crystallographica Section A Foundations and Advances\",\"volume\":\"59 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2023-07-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta Crystallographica Section A Foundations and Advances\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1107/s2053273323098133\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Acta Crystallographica Section A Foundations and Advances","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1107/s2053273323098133","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
小角 X 射线散射(SAXS)是大分子晶体学、核磁共振(NMR)和低温电子显微镜(Cryo-EM)技术的补充技术,在结构生物学中的应用越来越广泛。晶体学需要良好的晶体,而核磁共振则有尺寸限制。低温电磁技术研究冷冻状态下的生物分子。另一方面,SAXS可以研究溶液中的大生物分子及其复合物的结构和动力学,以及在盐浓度、pH值、有配体或无配体等各种条件下,以及在温度和压力等不断变化的样品环境中的结构和动力学。SAXS 不仅能提供有关生物大分子大小和形状的总体信息,还能提供有关其流动性和构象组合的信息。SAXS 数据还可与其他生物物理方法(包括晶体学、核磁共振、原子力显微镜和低温电子显微镜)配合使用,提供额外的约束条件,进一步改进模拟、验证结构模型以及查找缺失的片段。美国国家癌症研究所(NCI)的 SAXS 设施向所有校内和校外研究团体开放。SAXS 核心设施的任务是为用户群体提供实验设计、数据收集、处理、分析和解释方面的专业知识支持。研究领域包括但不限于核酸、蛋白质、蛋白质组装体、病毒颗粒、脂质膜和膜蛋白/DNA 复合物的结构研究。本报告简要介绍了 NCI SAXS 设施,并重点介绍了 NCI SAXS 核心用户最近在结构生物学领域取得的科学成就。NCI SAXS 核心网站:https://ccr.cancer.gov/center - for -structural-biology/saxs-core-facility
Small-angle X-ray scattering applications in structural biology
Small-angle X - ray scattering (SAXS) is a complementary technique to Macromolecular Crystallography, NMR and Cryo -EM techniques and is becoming more widely used in structural biology. Crystallography requires good crystals and NMR has a size limitation. Cryo - EM studies biomolecules under a frozen condition. SAXS, on the other hand, allows for the study of the structure and dynamics of macrobiomolecules and their complexes in solution and under various buffer conditions such as salt concentration, pH, with or without ligand as well as under changing sample environments such as temperature and pressure. SAXS provides insight not only into global information about size and shape of biomacrobiomolecules, but also the information about flexibility and an ensemble of conformers. SAXS data can also be used in tandem with other biophysical methods (including crystallography, NMR, AFM and cryo-EM) by providing additional restraints that further improve simulations, validate structural models as well as fi nd missing fragments. The SAXS Facility of the Natio nal Cancer Institute (NCI) opens to all intramural and extramural research communities. The mission of the SAXS Core Facility is to provide support to the user communities with expertise in experimental design, data collection, processing, analysis, and in terpretation. The research fi eld includes but is not limited to structural studies of nucleic acids, proteins, protein assemblies, virus particles, lipid membranes and membrane-protein/DNA complexes. This presentation gives a brief introduction to the NCI SAXS facility and highlights recent scientific achievements in structural biology produced by NCI SAXS core users. NCI SAXS Core website: https://ccr.cancer.gov/center - for -structural-biology/saxs-core-facility