Ahmed Edris, Kirsten Voorhies, Sharon M Lutz, Carlos Iribarren, Ian Hall, Ann Chen Wu, Martin Tobin, Katherine Fawcett, Lies Lahousse
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Individuals with asthma were identified using self-reported data, hospitalisation data and general practitioner records. Exacerbations were identified as either asthma-related hospitalisation, general practitioner record of asthma exacerbation or an oral corticosteroid burst prescription. A logistic regression model adjusted for age, sex, smoking status and genetic ancestry <i>via</i> principal components was used to assess the association between genetic variants and asthma exacerbations. We sought replication for suggestive associations (p<5×10<sup>-6</sup>) in the GERA cohort.</p><p><strong>Results: </strong>In the UK Biobank, we identified 11 604 cases and 37 890 controls. While no variants reached genome-wide significance (p<5×10<sup>-8</sup>) in the primary analysis, 116 signals were suggestively significant (p<5×10<sup>-6</sup>). In GERA, two single nucleotide polymorphisms (rs34643691 and rs149721630) replicated (p<0.05), representing signals near the NTRK3 and ABCA13 genes.</p><p><strong>Conclusions: </strong>Our study has identified reproducible associations with asthma exacerbations in the UK Biobank and GERA cohorts. Confirmation of these findings in different asthma subphenotypes in diverse ancestries and functional investigation will be required to understand their mechanisms of action and potentially inform therapeutic development.</p>","PeriodicalId":11739,"journal":{"name":"ERJ Open Research","volume":"10 1","pages":""},"PeriodicalIF":4.3000,"publicationDate":"2024-01-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10772900/pdf/","citationCount":"0","resultStr":"{\"title\":\"Asthma exacerbations and eosinophilia in the UK Biobank: a genome-wide association study.\",\"authors\":\"Ahmed Edris, Kirsten Voorhies, Sharon M Lutz, Carlos Iribarren, Ian Hall, Ann Chen Wu, Martin Tobin, Katherine Fawcett, Lies Lahousse\",\"doi\":\"10.1183/23120541.00566-2023\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Asthma exacerbations reflect disease severity, affect morbidity and mortality, and may lead to declining lung function. 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引用次数: 0
摘要
背景:哮喘恶化反映了疾病的严重程度,影响发病率和死亡率,并可能导致肺功能下降。炎症内型(如 T2-高(嗜酸性粒细胞))可能在哮喘恶化中起关键作用。我们的目的是评估遗传易感性是否是哮喘恶化风险的基础,并检测遗传变异和嗜酸性粒细胞增多对恶化风险的交互作用:英国生物库数据被用于开展一项全基因组关联研究,研究对象是哮喘且至少有一次哮喘加重的患者,与哮喘且无哮喘加重史的患者进行比较。哮喘患者是通过自我报告数据、住院数据和全科医生记录确定的。哮喘病恶化指的是与哮喘有关的住院治疗、全科医生的哮喘病恶化记录或口服皮质类固醇的处方。通过主成分对年龄、性别、吸烟状况和遗传血统进行调整后,采用逻辑回归模型评估遗传变异与哮喘恶化之间的关联。我们试图在 GERA 队列中复制提示性关联(p-6):在英国生物库中,我们发现了 11 604 个病例和 37 890 个对照。虽然在主要分析中没有变异达到全基因组意义(p-8),但有 116 个信号具有提示意义(p-6)。在 GERA 中,两个单核苷酸多态性(rs34643691 和 rs149721630)重复(p 结论:我们的研究在英国生物库和 GERA 队列中发现了与哮喘恶化相关的重复性关联。需要在不同血统的不同哮喘亚型中证实这些发现并进行功能调查,以了解其作用机制,并为治疗方法的开发提供潜在信息。
Asthma exacerbations and eosinophilia in the UK Biobank: a genome-wide association study.
Background: Asthma exacerbations reflect disease severity, affect morbidity and mortality, and may lead to declining lung function. Inflammatory endotypes (e.g. T2-high (eosinophilic)) may play a key role in asthma exacerbations. We aimed to assess whether genetic susceptibility underlies asthma exacerbation risk and additionally tested for an interaction between genetic variants and eosinophilia on exacerbation risk.
Methods: UK Biobank data were used to perform a genome-wide association study of individuals with asthma and at least one exacerbation compared to individuals with asthma and no history of exacerbations. Individuals with asthma were identified using self-reported data, hospitalisation data and general practitioner records. Exacerbations were identified as either asthma-related hospitalisation, general practitioner record of asthma exacerbation or an oral corticosteroid burst prescription. A logistic regression model adjusted for age, sex, smoking status and genetic ancestry via principal components was used to assess the association between genetic variants and asthma exacerbations. We sought replication for suggestive associations (p<5×10-6) in the GERA cohort.
Results: In the UK Biobank, we identified 11 604 cases and 37 890 controls. While no variants reached genome-wide significance (p<5×10-8) in the primary analysis, 116 signals were suggestively significant (p<5×10-6). In GERA, two single nucleotide polymorphisms (rs34643691 and rs149721630) replicated (p<0.05), representing signals near the NTRK3 and ABCA13 genes.
Conclusions: Our study has identified reproducible associations with asthma exacerbations in the UK Biobank and GERA cohorts. Confirmation of these findings in different asthma subphenotypes in diverse ancestries and functional investigation will be required to understand their mechanisms of action and potentially inform therapeutic development.
期刊介绍:
ERJ Open Research is a fully open access original research journal, published online by the European Respiratory Society. The journal aims to publish high-quality work in all fields of respiratory science and medicine, covering basic science, clinical translational science and clinical medicine. The journal was created to help fulfil the ERS objective to disseminate scientific and educational material to its members and to the medical community, but also to provide researchers with an affordable open access specialty journal in which to publish their work.