在不断扩大的酿酒酵母垫中,种群数量-散布权衡对体能的影响。

IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Physical biology Pub Date : 2024-01-22 DOI:10.1088/1478-3975/ad1ccd
Rebekah Hall, Akila Bandara, Daniel A Charlebois
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引用次数: 0

摘要

真菌在空间和时间上不断扩大,形成复杂的多细胞群落。它们的扩张机制可能会有很大的不同,并决定了扩张种群的生活史和扩散特征。这些特征会影响进化过程中的确定性和随机性因素,从而导致群落扩展过程中复杂的生态进化动态。我们对经基因工程改造的芽殖酵母菌株进行了实验,使其在被称为 "垫 "的群体状结构中表现出粗糙表面和光滑表面的表型。以前的研究表明,在半固体培养基上生长时,粗糙表面菌株比光滑表面菌株具有竞争优势。我们通过实验观察到,在粗糙表面垫的发育过程中,具有明显光滑表面表型的区段出现并扩大。我们提出了在扩散和局部承载能力之间进行权衡的方法,以解释这两种表型的相对适应性。利用一个改进的阶石模型,我们证明了这种权衡使高分散性的粗糙表面表型从常态变异中获得了竞争优势,但却抑制了这种表型通过突变入侵常驻的光滑表面种群的能力。然而,这种权衡提高了光滑表面表型在粗糙表面垫中的入侵能力,复制了实验中光滑表面片段的频繁出现。这些计算和实验结果共同推进了我们对真菌垫扩展的复杂生态进化动态的理解。
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Fitness effects of a demography-dispersal trade-off in expandingSaccharomyces cerevisiaemats.

Fungi expand in space and time to form complex multicellular communities. The mechanisms by which they do so can vary dramatically and determine the life-history and dispersal traits of expanding populations. These traits influence deterministic and stochastic components of evolution, resulting in complex eco-evolutionary dynamics during colony expansion. We perform experiments on budding yeast strains genetically engineered to display rough-surface and smooth-surface phenotypes in colony-like structures called 'mats'. Previously, it was shown that the rough-surface strain has a competitive advantage over the smooth-surface strain when grown on semi-solid media. We experimentally observe the emergence and expansion of segments with a distinct smooth-surface phenotype during rough-surface mat development. We propose a trade-off between dispersal and local carrying capacity to explain the relative fitness of these two phenotypes. Using a modified stepping-stone model, we demonstrate that this trade-off gives the high-dispersing, rough-surface phenotype a competitive advantage from standing variation, but that it inhibits this phenotype's ability to invade a resident smooth-surface population via mutation. However, the trade-off improves the ability of the smooth-surface phenotype to invade in rough-surface mats, replicating the frequent emergence of smooth-surface segments in experiments. Together, these computational and experimental findings advance our understanding of the complex eco-evolutionary dynamics of fungal mat expansion.

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来源期刊
Physical biology
Physical biology 生物-生物物理
CiteScore
4.20
自引率
0.00%
发文量
50
审稿时长
3 months
期刊介绍: Physical Biology publishes articles in the broad interdisciplinary field bridging biology with the physical sciences and engineering. This journal focuses on research in which quantitative approaches – experimental, theoretical and modeling – lead to new insights into biological systems at all scales of space and time, and all levels of organizational complexity. Physical Biology accepts contributions from a wide range of biological sub-fields, including topics such as: molecular biophysics, including single molecule studies, protein-protein and protein-DNA interactions subcellular structures, organelle dynamics, membranes, protein assemblies, chromosome structure intracellular processes, e.g. cytoskeleton dynamics, cellular transport, cell division systems biology, e.g. signaling, gene regulation and metabolic networks cells and their microenvironment, e.g. cell mechanics and motility, chemotaxis, extracellular matrix, biofilms cell-material interactions, e.g. biointerfaces, electrical stimulation and sensing, endocytosis cell-cell interactions, cell aggregates, organoids, tissues and organs developmental dynamics, including pattern formation and morphogenesis physical and evolutionary aspects of disease, e.g. cancer progression, amyloid formation neuronal systems, including information processing by networks, memory and learning population dynamics, ecology, and evolution collective action and emergence of collective phenomena.
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