微生物培养物的生长符合热力学定律

IF 3.3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Biophysical chemistry Pub Date : 2024-01-09 DOI:10.1016/j.bpc.2024.107177
Alberto Schiraldi
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引用次数: 0

摘要

本文以细胞复制的简单方案为基础,将之前提出的生长模型转化为系统(培养基+微生物)吉布斯自由能的热力学平衡。在每个复制步骤中,细胞从周围的培养基中获得少量额外的吉布斯自由能,并通过放热效应损失一些能量。事实证明,每个复制步骤都意味着系统熵的增加,但参与复制的细胞的熵却在减少。因此,复制步骤的总数决定了整个生长过程的能量平衡。生长模型意味着这一数字与最大特定生长率和生长开始前的无生长潜伏期之间的关系,这两个参数反映了细胞的生物效率。因此,根据该模型确定的复制步骤总数似乎是微生物培养物适应性的最佳代表。因此,在长期进化实验(LTEE)中,适宜性的增加将对应于更大的生长范围和特定速率,以及更短的生长前潜伏期。这表明,通过几千代的长期进化实验积累的吉布斯自由能的增加会导致更快地达到最终的生长稳定状态,并加快系统熵的增加。如果将这一趋势应用于使用恒温器进行的连续 LTEE,就会发现培养物(培养基+细胞)的进化是一个不可逆的过程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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The growth of microbial cultures complies with the laws of thermodynamics

The paper is the translation of the previously proposed growth model in a thermodynamic balance of the Gibbs free energy of the system (medium + microbes), based on a simple scheme of the cell duplication. In each duplication step, the cells garner a small extra Gibbs energy from the surrounding medium that loses also some energy through an exothermic effect. It turns out that the each duplication step implies an increase of the entropy of the system, but a decrease of the entropy of the involved cells. The overall number of duplication steps therefore determines the energy balance of the whole growth process. The growth model implies a relationship that links this number with the maximum specific growth rate and the no-growth latency that precedes the growth onset, namely, two parameters that reflect the biological efficiency of the cells. For this reason, the overall number of duplication steps, determined according to this model, seems the best proxy of the fitness of the microbial culture. In a Long Term Evolution Experiment (LTEE), the increasing fitness would therefore correspond to larger growth extent and specific rate, as well as to shorter pre-growth latency. This suggests that the gain of Gibbs free energy accumulated through the LTEE several-thousand generations leads to a faster attainment of the eventual steady state of the growth and a faster increase of the entropy of the system. If applied to a continuous LTEE carried out with a chemostat, this trend should reveal that the evolution of the culture (medium + cells) is an irreversible process.

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来源期刊
Biophysical chemistry
Biophysical chemistry 生物-生化与分子生物学
CiteScore
6.10
自引率
10.50%
发文量
121
审稿时长
20 days
期刊介绍: Biophysical Chemistry publishes original work and reviews in the areas of chemistry and physics directly impacting biological phenomena. Quantitative analysis of the properties of biological macromolecules, biologically active molecules, macromolecular assemblies and cell components in terms of kinetics, thermodynamics, spatio-temporal organization, NMR and X-ray structural biology, as well as single-molecule detection represent a major focus of the journal. Theoretical and computational treatments of biomacromolecular systems, macromolecular interactions, regulatory control and systems biology are also of interest to the journal.
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