Pylabianca:用于单神经元数据分析的全面且用户友好的 Python 软件包。

IF 1.4 4区 医学 Q4 NEUROSCIENCES Acta neurobiologiae experimentalis Pub Date : 2023-12-28 DOI:10.55782/ane-2023-2440
Mikołaj Magnuski, Władysław Średniawa, Katarzyna Paluch, Davor Ivanovski, Harish Babu, Jan Kaminski
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引用次数: 0

摘要

在电生理学领域,用于单神经元数据处理、统计分析以及快速直观的数据可视化的全面且用户友好的工具非常有限。为了填补这一空白,我们引入了 pylabianca,这是一个专为强大的单神经元和多神经元数据处理而定制的 Python 库。Pylabianca 利用了标准 Python 软件包的强大功能,并采用了 MNE-Python 的应用编程接口,MNE-Python 是应用最广泛的电生理学软件包之一。pylabianca 的主要目标之一是降低科学家的入门门槛,只需具备基本的 Python 编程技能。Pylabianca 的设计目的是简化单神经元数据的最常见分析,并提供方便的数据结构,作为构建自定义分析管道的基础。我们相信,pylabianca 将有助于提高研究人员在单神经元电生理学领域的能力和效率。
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Pylabianca: comprehensive and user‑friendly Python package for single‑neuron data analysis.

In the area of electrophysiology, the availability of comprehensive and user‑friendly tools for single-neuron data processing, statistical analysis, and fast, intuitive data visualization is limited. To address this gap, we introduce pylabianca, a Python library tailored for robust single and multi‑unit data processing. Pylabianca leverages the power of standard Python packages and adopts the application programming interface of MNE‑Python, one of the most widely used electrophysiology packages. One of pylabianca's primary objectives is to provide a low entry threshold for scientists, requiring only basic Python programming skills. Pylabianca was designed to streamline most common analyses of single neuron data, and provide convenient data structures to serve as a foundation for building custom analysis pipelines. We believe that pylabianca will contribute to enhancing researchers' capabilities and efficiency in the field of single-neuron electrophysiology.

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来源期刊
CiteScore
2.20
自引率
7.10%
发文量
40
审稿时长
>12 weeks
期刊介绍: Acta Neurobiologiae Experimentalis (ISSN: 0065-1400 (print), eISSN: 1689-0035) covers all aspects of neuroscience, from molecular and cellular neurobiology of the nervous system, through cellular and systems electrophysiology, brain imaging, functional and comparative neuroanatomy, development and evolution of the nervous system, behavior and neuropsychology to brain aging and pathology, including neuroinformatics and modeling.
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