比较蛋白质组学揭示了酒精性肝硬化患者血小板中不同的蛋白质表达。

IF 2.1 3区 生物学 Q3 BIOCHEMICAL RESEARCH METHODS Proteome Science Pub Date : 2024-01-26 DOI:10.1186/s12953-024-00227-y
Nima Haji Begli, Cora Freund, Karl-Heinz Weiss, Daniel Gotthardt, Andreas Wannhoff
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引用次数: 0

摘要

背景:人们对血小板在疾病进展中的作用以及血小板作为肝硬化患者止血和免疫系统的一部分的功能尚不完全了解。部分原因在于评估血小板功能存在困难。血小板蛋白质组分析已被用于进一步研究血小板在其他疾病中的作用。目的:与健康供体相比,评估酒精诱导的肝硬化不同阶段血小板蛋白质组可能发生的变化:从 18 名年龄在 18-80 岁之间的参与者中抽取 45 毫升血液样本,平均分为三组:健康供体、晚期酒精诱发肝硬化患者(Child-Pugh 10)。对血液进行处理以分离血小板,然后使用 SYPRO™ Ruby 染料进行二维凝胶电泳。经过计算分析,发现了明显增加或减少的蛋白质点(定义为不同研究队列之间丰度变化两倍,方差分析结果):比较分析发现,在肝硬化患者中,有四种血小板蛋白的表达量逐渐减少。尤其是 Ras 相关蛋白 Rab-7a (Rab-7a)、Ran 特异性结合蛋白 1 (RANBP1)、Rho GDP 解离抑制剂 1 (RhoGDI1) 和 14-3-3 gamma:结论:在酒精诱导的肝硬化疾病进展过程中,血小板蛋白质组中的蛋白质表达发生了明显变化。结论:在酒精诱导的肝硬化疾病进展过程中,血小板蛋白质组中的蛋白质表达发生了明显变化,已发现的蛋白质可能参与了血小板的止血和免疫调节功能。
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Comparative proteomics reveals different protein expression in platelets in patients with alcoholic liver cirrhosis.

Background: The role of platelets in disease progression as well as the function of platelets as part of the haemostatic and immunological system in patients with liver cirrhosis is only incompletely understood. This is partly due to difficulties in assessing platelet function. Proteome analyses of platelets have been used to further investigate the role of platelets in other diseases.

Aim: To assess possible changes in the platelet proteome during different stages of alcohol induced liver cirrhosis compared to healthy donors.

Patients and methods: A 45 ml blood sample was drawn from 18 participants aged 18-80 years evenly divided into three groups of healthy donors, patients with less advanced alcohol induced liver cirrhosis (Child-Pugh < 7) and patients with advanced liver cirrhosis (Child-Pugh > 10). The blood was processed to isolate platelets and perform subsequent two-dimensional gel-electrophoresis using a SYPRO™ Ruby dye. After computational analysation significantly in- or decreased protein spots (defined as a two-fold abundance change between different study cohorts and ANOVA < 0.05) were identified via liquid chromatography-mass spectrometry (LCMS) and searching against human protein databases.

Results: The comparative analysis identified four platelet proteins with progressively decreased protein expression in patients with liver cirrhosis. More specifically Ras-related protein Rab-7a (Rab-7a), Ran-specific binding protein 1 (RANBP1), Rho GDP-dissociation inhibitor 1 (RhoGDI1), and 14-3-3 gamma.

Conclusion: There is significant change in protein expression in the platelet proteome throughout the disease progression of alcohol induced liver cirrhosis. The identified proteins are possibly involved in haemostatic and immunoregulatory function of platelets.

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来源期刊
Proteome Science
Proteome Science 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
17
审稿时长
4.5 months
期刊介绍: Proteome Science is an open access journal publishing research in the area of systems studies. Proteome Science considers manuscripts based on all aspects of functional and structural proteomics, genomics, metabolomics, systems analysis and metabiome analysis. It encourages the submissions of studies that use large-scale or systems analysis of biomolecules in a cellular, organismal and/or environmental context. Studies that describe novel biological or clinical insights as well as methods-focused studies that describe novel methods for the large-scale study of any and all biomolecules in cells and tissues, such as mass spectrometry, protein and nucleic acid microarrays, genomics, next-generation sequencing and computational algorithms and methods are all within the scope of Proteome Science, as are electron topography, structural methods, proteogenomics, chemical proteomics, stem cell proteomics, organelle proteomics, plant and microbial proteomics. In spite of its name, Proteome Science considers all aspects of large-scale and systems studies because ultimately any mechanism that results in genomic and metabolomic changes will affect or be affected by the proteome. To reflect this intrinsic relationship of biological systems, Proteome Science will consider all such articles.
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