基因-环境相互作用与早产预测因素:贝叶斯网络方法

IF 1.7 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY Genetics and Molecular Biology Pub Date : 2024-01-19 eCollection Date: 2024-01-01 DOI:10.1590/1678-4685-GMB-2023-0090
Dario E Elias, Maria R Santos, Hebe Campaña, Fernando A Poletta, Silvina L Heisecke, Juan A Gili, Julia Ratowiecki, Viviana R Cosentino, Rocio Uranga, Diana Rojas Málaga, Alice Brinckmann Oliveira Netto, Ana Carolina Brusius-Facchin, César Saleme, Mónica Rittler, Hugo B Krupitzki, Jorge S Lopez Camelo, Lucas G Gimenez
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引用次数: 0

摘要

早产(PTB)是全球围产期死亡率的主要相关疾病。本研究旨在确定与自发性早产或其预测因素相关的基因-环境相互作用。我们开展了一项回顾性病例对照研究,其中包括 2005 年至 2010 年期间在阿根廷图库曼一家妇产医院出生的 69 名早产儿和 61 名足月新生儿的父母社会人口学和产科数据以及新生儿基因变异。我们创建了一个数据驱动的贝叶斯网络,其中包括主要的早产儿预测因子,并确定了基因与环境之间的相互作用。我们使用逻辑回归来计算交互作用的几率比和置信区间。从主要的弓形虫病预测因子(9 种暴露和 6 种基因变异)中,我们发现了低社区社会经济地位与 rs2074351(PON1,基因型 GG)变异之间的相互作用,这种相互作用与弓形虫病风险的增加有关(几率比 12.51,置信区间 95%:1.71 - 91.36)。这项探索性研究的结果表明,结构性的社会差异可能会通过增加暴露的频率来影响弓形虫病的风险,而暴露的频率会增强与遗传特征等个体特征相关的风险。今后有必要进行样本量更大的研究,以证实这些发现。
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Gene-environment interactions and preterm birth predictors: A Bayesian network approach.

Preterm birth (PTB) is the main condition related to perinatal morbimortality worldwide. The aim of this study was to identify gene-environment interactions associated with spontaneous PTB or its predictors. We carried out a retrospective case-control study including parental sociodemographic and obstetric data as well as newborn genetic variants of 69 preterm and 61 at term newborns born at a maternity hospital from Tucumán, Argentina, between 2005 and 2010. A data-driven Bayesian network including the main PTB predictors was created where we identified gene-environment interactions. We used logistic regressions to calculate the odds ratios and confidence intervals of the interactions. From the main PTB predictors (nine exposures and six genetic variants) we identified an interaction between low neighbourhood socioeconomic status and rs2074351 (PON1, genotype GG) variant that was associated with an increased risk of toxoplasmosis (odds ratio 12.51, confidence interval 95%: 1.71 - 91.36). The results of this exploratory study suggest that structural social disparities could influence the PTB risk by increasing the frequency of exposures that potentiate the risk associated with individual characteristics such as genetic traits. Future studies with larger sample sizes are necessary to confirm these findings.

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来源期刊
Genetics and Molecular Biology
Genetics and Molecular Biology 生物-生化与分子生物学
CiteScore
4.20
自引率
4.80%
发文量
111
审稿时长
3 months
期刊介绍: Genetics and Molecular Biology (formerly named Revista Brasileira de Genética/Brazilian Journal of Genetics - ISSN 0100-8455) is published by the Sociedade Brasileira de Genética (Brazilian Society of Genetics). The Journal considers contributions that present the results of original research in genetics, evolution and related scientific disciplines. Manuscripts presenting methods and applications only, without an analysis of genetic data, will not be considered.
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