CarbDisMut:人类碳水化合物结合蛋白中的中性突变和致病突变数据库。

IF 3.4 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY Glycobiology Pub Date : 2024-04-10 DOI:10.1093/glycob/cwae011
N R Siva Shanmugam, A Kulandaisamy, K Veluraja, M Michael Gromiha
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引用次数: 0

摘要

蛋白质与碳水化合物的相互作用涉及多种细胞和生物功能。将碳水化合物结合蛋白的结构和功能与致病突变结合起来,有助于了解疾病的分子基础。虽然目前已有基于结构、结合亲和力和功能的蛋白质-碳水化合物复合物数据库,但还没有关于人类碳水化合物结合蛋白突变的专门数据库。我们开发了一个新的数据库--CarbDisMut,这是一个具有序列和结构特征的致病突变综合资源库。该数据库拥有来自 7,187 个人类碳水化合物结合蛋白的 117 万个疾病相关突变和 38,636 个中性突变。该数据库可通过 https://web.iitm.ac.in/bioinfo2/carbdismut 免费获取。该网站使用 HTML、PHP 和 JavaScript 实现,支持所有主要浏览器的最新版本,如 Firefox、Chrome 和 Opera。
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CarbDisMut: database on neutral and disease-causing mutations in human carbohydrate-binding proteins.

Protein-carbohydrate interactions are involved in several cellular and biological functions. Integrating structure and function of carbohydrate-binding proteins with disease-causing mutations help to understand the molecular basis of diseases. Although databases are available for protein-carbohydrate complexes based on structure, binding affinity and function, no specific database for mutations in human carbohydrate-binding proteins is reported in the literature. We have developed a novel database, CarbDisMut, a comprehensive integrated resource for disease-causing mutations with sequence and structural features. It has 1.17 million disease-associated mutations and 38,636 neutral mutations from 7,187 human carbohydrate-binding proteins. The database is freely available at https://web.iitm.ac.in/bioinfo2/carbdismut. The web-site is implemented using HTML, PHP and JavaScript and supports recent versions of all major browsers, such as Firefox, Chrome and Opera.

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来源期刊
Glycobiology
Glycobiology 生物-生化与分子生物学
CiteScore
7.50
自引率
4.70%
发文量
73
审稿时长
3 months
期刊介绍: Established as the leading journal in the field, Glycobiology provides a unique forum dedicated to research into the biological functions of glycans, including glycoproteins, glycolipids, proteoglycans and free oligosaccharides, and on proteins that specifically interact with glycans (including lectins, glycosyltransferases, and glycosidases). Glycobiology is essential reading for researchers in biomedicine, basic science, and the biotechnology industries. By providing a single forum, the journal aims to improve communication between glycobiologists working in different disciplines and to increase the overall visibility of the field.
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