过敏性休克患者血清小非编码 RNA 的循环图谱超越 microRNAs

IF 3.3 Q2 ALLERGY Frontiers in allergy Pub Date : 2024-02-07 DOI:10.3389/falgy.2024.1307880
S. Fernandez-Bravo, Diana Betancor, Javier Cuesta-Herranz, Pablo Rodríguez del Río, M. Ibáñez-Sandín, E. Nuñez-Borque, Vanesa Esteban
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引用次数: 0

摘要

过敏性休克是过敏性疾病最严重的表现。目前,越来越多参与过敏性休克发病机制的细胞、途径和分子被发现。然而,目前还没有确凿的生物标志物来确诊过敏性休克。小非编码 RNA(sncRNA)是 18-200 个核苷酸的分子,可分为:microRNA(miRNA)、Piwi-interacting RNA(piRNA)、小核仁 RNA(snoRNA)、小核 RNA(snRNA)、转录 RNA 衍生片段(tRF)和 YRNA 衍生片段(YRF)。这些分子参与细胞与细胞之间的交流,调节各种生理过程,并被推测为多种病症的非侵入性生物标志物。因此,在本研究中,我们分别对 5 名成人过敏性休克患者和 5 名食物过敏性休克患儿的血清循环中 miRNA 以外的其他 sncRNA 进行了特征分析。sncRNA 分析是通过新一代测序技术(NGS)进行的。在药物诱发过敏性休克的成人患者中,共鉴定出 671 个 sncRNA(3 个 piRNA、74 个 snoRNA、54 个 snRNA、348 个 tRF 和 192 个 YRF);在食物诱发过敏性休克的儿童患者中,鉴定出 612 个 sncRNA(2 个 piRNA、73 个 snoRNA、52 个 snRNA、321 个 tRF 和 164 个 YRF)。然而,只有 33 个(1 个 piRNA、4 个 snoRNA、1 个 snRNA、7 个 tRFs 和 20 个 YRFs)和 80 个(4 个 snoRNA、6 个 snRNA、54 个 tRFs 和 16 个 YRFs)分别在两种情况下存在统计学差异。这项研究提供了过敏性休克患者循环血清中 miRNAs 之外的 sncRNAs 的差异概况,并将它们推测为这一病理事件的候选生物标志物和新的反应介质。
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Circulating serum profile of small non-coding RNAs in patients with anaphylaxis beyond microRNAs
Anaphylaxis is the most severe manifestation of allergic disorders. Currently, an increasing number of cells, pathways and molecules involved in the etiopathogenesis of anaphylaxis are being discovered. However, there are no conclusive biomarkers to confirm its diagnosis. Small non-coding RNAs (sncRNAs) are 18-200 nucleotide molecules that can be divided into: microRNAs (miRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs), small nuclear RNAs (snRNAs), transference RNA derived fragments (tRFs) and YRNA derived fragments (YRFs). These molecules participate in cell-cell communication modulating various physiological processes and have been postulated as non-invasive biomarkers of several pathologies. Therefore, in this study we characterized the serum circulating profile of other sncRNA beyond miRNAs in two populations of 5 adults and 5 children with drug- and food-mediated anaphylaxis, respectively.Samples were obtained from each patient under two different conditions: during anaphylaxis and 14 days after the reaction (control). The sncRNA analysis was carried out by Next Generation Sequencing (NGS).A total of 671 sncRNAs (3 piRNAs, 74 snoRNAs, 54 snRNAs, 348 tRFs and 192 YRFs) were identified in adults with drug-induced anaphylaxis, while 612 sncRNAs (2 piRNAs, 73 snoRNAs, 52 snRNAs, 321 tRFs and 164 YRFs) were characterized in children with food-mediated anaphylaxis. However, only 33 (1 piRNA, 4 snoRNAs, 1 snRNAs, 7 tRFs and 20 YRFs) and 80 (4 snoRNAs, 6 snRNAs, 54 tRFs and 16 YRFs) of them were statistically different between both conditions, respectively. Among them, only three (Y_RNA.394, Y_RNA.781 and SCARNA2) were common to both adults and children analysis.This study provides a differential profile of circulating serum sncRNAs beyond miRNAs in patients with anaphylaxis, postulating them as candidate biomarkers for this pathological event and as novel mediators of the reaction.
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