V. R. Umashree, Madangchanok Imchen, Ranjith Kumavath, Kulanthaiyesu Arunkumar
{"title":"细菌正常生物学与水螅虫的生长;元基因组和培养研究揭示了相关细菌多样性的新见解","authors":"V. R. Umashree, Madangchanok Imchen, Ranjith Kumavath, Kulanthaiyesu Arunkumar","doi":"10.1007/s41208-024-00687-1","DOIUrl":null,"url":null,"abstract":"<p>In this study, agarophyte <i>Gracilaria edulis</i> was successfully cultivated in laboratory condition. An attempt to grow <i>G. edulis</i> by removing associated bacteria was made to identify their role in the host growth. But antibiotic treatment did not remove the associated bacteria completely rather reduced the bacterial load. Antibiotic untreated (ABUT) sample grew well in the beginning of culture but degraded gradually in prolonged cultivation. This ascertained by the dominance of surface-associated harmful bacteria. The antibiotic treatment for 48 h (ABT-T48) showed the best growth but antibiotic treatment for 48 h weekly once for 4 weeks (ABT-W48) resulted comparatively less growth. The metagenomic analysis revealed variation in the bacterial diversity and population between the samples of ABUT and ABT-W48. The ABUT sample possessed abundant agar-degrading and algae-lytic bacteria. In contrast, numerous beneficial bacteria like <i>Lactobacillus, Prevotella, Clostridium</i> and <i>Swaminathania</i> are dominant in ABT-W48 sample. It was observed that weekly antibiotic treatment inhibited some beneficial bacteria like <i>Acetobacter</i>. This show necessity of moderate antibiotic treatments to reduce harmful bacteria and encourage beneficial bacteria association. Removing the harmful bacteria promote the alga growth by keeping a balance in bacterial diversity (normobiosis) within the host. Six culturable bacteria associated with <i>G. edulis</i> isolated and identified are <i>Vibrio brasiliensis</i>, two strains of <i>Paracoccus zeaxanthinifaciens, Alteromonas</i> sp., <i>Pseudoalteromonas</i> sp.(a putative novel), and <i>Bacillus licheniformis</i>.</p>","PeriodicalId":22298,"journal":{"name":"Thalassas: An International Journal of Marine Sciences","volume":"23 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-02-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Bacteria Normobiosis and Gracilaria edulis Growth; Metagenomic and Culture Studies Unfold New Insights on the Associated Bacterial Diversity\",\"authors\":\"V. R. Umashree, Madangchanok Imchen, Ranjith Kumavath, Kulanthaiyesu Arunkumar\",\"doi\":\"10.1007/s41208-024-00687-1\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>In this study, agarophyte <i>Gracilaria edulis</i> was successfully cultivated in laboratory condition. An attempt to grow <i>G. edulis</i> by removing associated bacteria was made to identify their role in the host growth. But antibiotic treatment did not remove the associated bacteria completely rather reduced the bacterial load. Antibiotic untreated (ABUT) sample grew well in the beginning of culture but degraded gradually in prolonged cultivation. This ascertained by the dominance of surface-associated harmful bacteria. The antibiotic treatment for 48 h (ABT-T48) showed the best growth but antibiotic treatment for 48 h weekly once for 4 weeks (ABT-W48) resulted comparatively less growth. The metagenomic analysis revealed variation in the bacterial diversity and population between the samples of ABUT and ABT-W48. The ABUT sample possessed abundant agar-degrading and algae-lytic bacteria. In contrast, numerous beneficial bacteria like <i>Lactobacillus, Prevotella, Clostridium</i> and <i>Swaminathania</i> are dominant in ABT-W48 sample. It was observed that weekly antibiotic treatment inhibited some beneficial bacteria like <i>Acetobacter</i>. This show necessity of moderate antibiotic treatments to reduce harmful bacteria and encourage beneficial bacteria association. Removing the harmful bacteria promote the alga growth by keeping a balance in bacterial diversity (normobiosis) within the host. Six culturable bacteria associated with <i>G. edulis</i> isolated and identified are <i>Vibrio brasiliensis</i>, two strains of <i>Paracoccus zeaxanthinifaciens, Alteromonas</i> sp., <i>Pseudoalteromonas</i> sp.(a putative novel), and <i>Bacillus licheniformis</i>.</p>\",\"PeriodicalId\":22298,\"journal\":{\"name\":\"Thalassas: An International Journal of Marine Sciences\",\"volume\":\"23 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-02-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Thalassas: An International Journal of Marine Sciences\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1007/s41208-024-00687-1\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Thalassas: An International Journal of Marine Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1007/s41208-024-00687-1","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Bacteria Normobiosis and Gracilaria edulis Growth; Metagenomic and Culture Studies Unfold New Insights on the Associated Bacterial Diversity
In this study, agarophyte Gracilaria edulis was successfully cultivated in laboratory condition. An attempt to grow G. edulis by removing associated bacteria was made to identify their role in the host growth. But antibiotic treatment did not remove the associated bacteria completely rather reduced the bacterial load. Antibiotic untreated (ABUT) sample grew well in the beginning of culture but degraded gradually in prolonged cultivation. This ascertained by the dominance of surface-associated harmful bacteria. The antibiotic treatment for 48 h (ABT-T48) showed the best growth but antibiotic treatment for 48 h weekly once for 4 weeks (ABT-W48) resulted comparatively less growth. The metagenomic analysis revealed variation in the bacterial diversity and population between the samples of ABUT and ABT-W48. The ABUT sample possessed abundant agar-degrading and algae-lytic bacteria. In contrast, numerous beneficial bacteria like Lactobacillus, Prevotella, Clostridium and Swaminathania are dominant in ABT-W48 sample. It was observed that weekly antibiotic treatment inhibited some beneficial bacteria like Acetobacter. This show necessity of moderate antibiotic treatments to reduce harmful bacteria and encourage beneficial bacteria association. Removing the harmful bacteria promote the alga growth by keeping a balance in bacterial diversity (normobiosis) within the host. Six culturable bacteria associated with G. edulis isolated and identified are Vibrio brasiliensis, two strains of Paracoccus zeaxanthinifaciens, Alteromonas sp., Pseudoalteromonas sp.(a putative novel), and Bacillus licheniformis.