磷酸盐处理下霍山石斛的蛋白质组学数据说明。

IF 1.9 Q3 GENETICS & HEREDITY BMC genomic data Pub Date : 2024-02-21 DOI:10.1186/s12863-024-01205-1
Jun Dai, Yingyu Zhang, Yunpeng Zhang, Yan Wang, Xiaoyuan Ding, Cheng Song
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引用次数: 0

摘要

目的:铅胁迫通过干扰光合作用和释放活性氧对植物生长产生负面影响,造成土壤基质中重金属离子积累等重大风险。我们进行了一项蛋白质组学实验,以确定在喷洒 200 毫克/升铅(NO3)2 溶液七至十五天后,铁皮石斛的蛋白质水平是否因铅胁迫而发生变化。我们收集的蛋白质组数据为研究铁皮石斛植物抵抗重金属胁迫的机制提供了一个模型:我们采用无标记定量蛋白质组学方法研究了铁皮石斛在不同Pb(NO3)2处理时间蛋白质表达水平的变化。我们将这些蛋白质组学测序实验所获得的原始数据提交给了 ProteomeXchange 数据库,其登录号为 PXD047050。在导入 Proteome Discoverer 软件进行数据库搜索后,共比较了 63,194 条质谱。共鉴定出 12,402 个谱肽,置信度超过 99%,从而鉴定出 2,449 个差异显著的蛋白质。这些蛋白质可用于重金属处理实验前后差异表达蛋白质的筛选、功能注释和富集分析。
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Data notes on the proteomics of Dendrobium huoshanense under pb treatment.

Objectives: Pb stress has a negative impact on plant growth by interfering with photosynthesis and releasing reactive oxygen species, causing major risks such as heavy metal ion accumulation in the soil matrix. A proteomics experiment was conducted to determine whether protein levels of Dendrobium huoshanense changed in response to Pb stress seven to fifteen days after being sprayed with a 200 mg/L Pb (NO3)2 solution. The proteomic data we gathered provides a model for investigations into the mechanisms underlying Dendrobium plant resistance to heavy metal stress.

Data description: A label-free quantitative proteomics approach was employed to examine the variations in protein expression levels of D. huoshanense at different times of Pb(NO3)2 treatment. We submitted the raw data obtained from these proteomics sequencing experiments to the ProteomeXchange database with the accession number PXD047050. 63,194 mass spectra in total were compared after being imported into the Proteome Discoverer software for database search. A total of 12,402 spectral peptides were identified with a confidence level exceeding 99%, which resulted in the identification of 2,449 significantly differential proteins. These proteins can be utilized for screening, functional annotation, and enrichment analysis of differentially expressed proteins before and after heavy metal treatment experiments.

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