树状信息贝叶斯多源领域适应:利用口头尸检进行跨人群死因概率分配。

IF 1.8 3区 数学 Q3 MATHEMATICAL & COMPUTATIONAL BIOLOGY Biostatistics Pub Date : 2024-10-01 DOI:10.1093/biostatistics/kxae005
Zhenke Wu, Zehang R Li, Irena Chen, Mengbing Li
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引用次数: 0

摘要

确定民事登记和生命统计系统之外的死亡原因(COD)具有挑战性。在实践中,一种名为口头尸检(VA)的技术被广泛用于收集死亡信息。口头尸检包括对死者亲属进行访谈,了解死者在死亡前的症状,通常会得出多变量二元回答。虽然已有统计方法用于估算研究人群的特定病因死亡率分数(CSMFs),但要继续将 VA 扩展到新的人群(或 "领域"),就必须采用既能认识到不同领域之间的差异,又能利用潜在相似性的方法。在本文中,我们提出了这样一种领域自适应方法,它整合了由预先指定的有根加权树编码的外部域间相似性信息。在给定原因的情况下,我们使用潜类模型来描述可能因领域而异的响应的条件分布。我们沿树为类混合权重指定了一个逻辑破棒高斯扩散过程先验,并指定了节点特定的尖峰和平板先验,以数据驱动的方式汇集域间信息。后验推断通过可扩展的变异贝叶斯算法进行。仿真研究表明,所提出方法的域适应性改进了 CSMF 估计和个体 COD 分配。我们还使用验证数据集对该方法进行了说明和评估。文章最后讨论了局限性和未来发展方向。
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Tree-informed Bayesian multi-source domain adaptation: cross-population probabilistic cause-of-death assignment using verbal autopsy.

Determining causes of deaths (CODs) occurred outside of civil registration and vital statistics systems is challenging. A technique called verbal autopsy (VA) is widely adopted to gather information on deaths in practice. A VA consists of interviewing relatives of a deceased person about symptoms of the deceased in the period leading to the death, often resulting in multivariate binary responses. While statistical methods have been devised for estimating the cause-specific mortality fractions (CSMFs) for a study population, continued expansion of VA to new populations (or "domains") necessitates approaches that recognize between-domain differences while capitalizing on potential similarities. In this article, we propose such a domain-adaptive method that integrates external between-domain similarity information encoded by a prespecified rooted weighted tree. Given a cause, we use latent class models to characterize the conditional distributions of the responses that may vary by domain. We specify a logistic stick-breaking Gaussian diffusion process prior along the tree for class mixing weights with node-specific spike-and-slab priors to pool information between the domains in a data-driven way. The posterior inference is conducted via a scalable variational Bayes algorithm. Simulation studies show that the domain adaptation enabled by the proposed method improves CSMF estimation and individual COD assignment. We also illustrate and evaluate the method using a validation dataset. The article concludes with a discussion of limitations and future directions.

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来源期刊
Biostatistics
Biostatistics 生物-数学与计算生物学
CiteScore
5.10
自引率
4.80%
发文量
45
审稿时长
6-12 weeks
期刊介绍: Among the important scientific developments of the 20th century is the explosive growth in statistical reasoning and methods for application to studies of human health. Examples include developments in likelihood methods for inference, epidemiologic statistics, clinical trials, survival analysis, and statistical genetics. Substantive problems in public health and biomedical research have fueled the development of statistical methods, which in turn have improved our ability to draw valid inferences from data. The objective of Biostatistics is to advance statistical science and its application to problems of human health and disease, with the ultimate goal of advancing the public''s health.
期刊最新文献
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