通过网络药理学鉴定冠心病中肠道微生物群的代谢物。

IF 4.5 3区 生物学 Q1 BIOTECHNOLOGY & APPLIED MICROBIOLOGY Artificial Cells, Nanomedicine, and Biotechnology Pub Date : 2024-12-01 Epub Date: 2024-02-27 DOI:10.1080/21691401.2024.2319827
Hao-Ming Zhou, Xin-Yu Yang, Shi-Jun Yue, Wen-Xiao Wang, Qiao Zhang, Ding-Qiao Xu, Jia-Jia Li, Yu-Ping Tang
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引用次数: 0

摘要

虽然肠道微生物代谢物对冠心病(CHD)有潜在影响,但其潜在机制仍不清楚。在这项研究中,我们通过网络药理学方法探索了对冠心病有作用的活性肠道微生物代谢物及其潜在的作用机制。我们从 gutMgene 数据库中收集了 208 种代谢物,并从相似性集合方法(SEA)和 SwissTargetPrediction(STP)数据库中收集了 726 个重叠靶点,最终确定了 610 个与 CHD 相关的靶点。结合 gutMGene 数据库,我们确定了 12 个关键靶点。去除外源性物质靶标,最终保留了10个与CHD相关的核心靶标。通过微生物群-代谢物-靶点-信号通路网络分析发现,C型凝集素受体信号通路、拉克氏菌、埃希氏菌、丝裂原活化蛋白激酶1、前列腺素内过氧化物酶合成酶2、苯乙酰谷氨酰胺和乙醇酸是CHD的重要组成成分,并在CHD的发病过程中发挥重要作用。分子对接实验结果表明,AKT1-甘氨胆酸和 PTGS2-苯乙酰谷氨酰胺复合物可能作用于 C 型凝集素受体信号通路。本研究通过网络药理学方法分析了肠道微生物代谢产物的关键物质和潜在机制,为肠道微生物代谢产物对CHD的影响提供了科学依据和全面的思路。
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The identification of metabolites from gut microbiota in coronary heart disease via network pharmacology.

Although the gut microbial metabolites exhibit potential effects on coronary heart disease (CHD), the underlying mechanism remains unclear. In this study, the active gut microbial metabolites acting on CHD and their potential mechanisms of action were explored through a network pharmacological approach. We collected a total of 208 metabolites from the gutMgene database and 726 overlapping targets from the similarity ensemble approach (SEA) and SwissTargetPrediction (STP) database, and ultimately identified 610 targets relevant to CHD. In conjunction with the gutMGene database, we identified 12 key targets. The targets of exogenous substances were removed, and 10 core targets involved in CHD were eventually retained. The microbiota-metabolites-targets-signalling pathways network analysis revealed that C-type lectin receptor signalling pathway, Lachnospiraceae, Escherichia, mitogen-activated protein kinase 1, prostaglandin-endoperoxidase synthase 2, phenylacetylglutamine and alcoholic acid are notable components of CHD and play important roles in the development of CHD. The results of molecular docking experiments demonstrated that AKT1-glycocholic acid and PTGS2-phenylacetylglutamine complexes may act on C-type lectin receptor signalling pathways. In this study, the key substances and potential mechanisms of gut microbial metabolites were analysed via network pharmacological methods, and a scientific basis and comprehensive idea were provided for the effects of gut microbial metabolites on CHD.

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来源期刊
Artificial Cells, Nanomedicine, and Biotechnology
Artificial Cells, Nanomedicine, and Biotechnology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-ENGINEERING, BIOMEDICAL
CiteScore
10.90
自引率
0.00%
发文量
48
审稿时长
20 weeks
期刊介绍: Artificial Cells, Nanomedicine and Biotechnology covers the frontiers of interdisciplinary research and application, combining artificial cells, nanotechnology, nanobiotechnology, biotechnology, molecular biology, bioencapsulation, novel carriers, stem cells and tissue engineering. Emphasis is on basic research, applied research, and clinical and industrial applications of the following topics:artificial cellsblood substitutes and oxygen therapeuticsnanotechnology, nanobiotecnology, nanomedicinetissue engineeringstem cellsbioencapsulationmicroencapsulation and nanoencapsulationmicroparticles and nanoparticlesliposomescell therapy and gene therapyenzyme therapydrug delivery systemsbiodegradable and biocompatible polymers for scaffolds and carriersbiosensorsimmobilized enzymes and their usesother biotechnological and nanobiotechnological approachesRapid progress in modern research cannot be carried out in isolation and is based on the combined use of the different novel approaches. The interdisciplinary research involving novel approaches, as discussed above, has revolutionized this field resulting in rapid developments. This journal serves to bring these different, modern and futuristic approaches together for the academic, clinical and industrial communities to allow for even greater developments of this highly interdisciplinary area.
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