用于在空间和时间上检测机械敏感信号蛋白的磁性纳米镊子。

4区 生物学 Q3 Biochemistry, Genetics and Molecular Biology Methods in enzymology Pub Date : 2024-01-01 Epub Date: 2024-02-20 DOI:10.1016/bs.mie.2024.01.009
Minsuk Kwak
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引用次数: 0

摘要

要了解细胞外线索如何转化为生化信号并对细胞反应进行不同程度的调控,就必须在单细胞水平上对信号转导进行时空分析。利用单细胞扰动工具(如光遗传学),可以在任何需要的位置和时间将特定的生化线索传递给选择性分子或细胞。通过测量细胞对所提供扰动的反应,研究人员已经解码和解构了各种神经电和生化信号转导过程的工作机制。然而,通过调节对细胞受体的机械输入来破译机械敏感信号的工作机制的类似方法仍未出现。为了满足这一尚未得到满足的需求,我们最近开发了一种基于纳米技术的单细胞和单分子扰动工具(称为机械遗传学),它能对活细胞中基因编码的细胞表面受体进行精确的空间和机械控制。该工具结合了磁荧光纳米粒子致动器(MFN)和微磁镊子,前者可通过目标特异性的一对一相互作用为受体提供精确的空间和机械信号,后者可远程控制施加在单个纳米粒子上的力。本章提供了全面的机械遗传学实验方案,包括四个阶段:(i) 化学合成微磁镊子,(ii) 生物共轭和纯化单价微磁镊子,(iii) 建立带有基因编码机械敏感蛋白的细胞,(iv) 模块化靶向和控制活细胞中的细胞表面受体。整个过程耗时一周。这种机械基因工具可用于研究与细胞信号传导和转录控制动态有关的许多悬而未决的问题,包括机械激活受体的机制。
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Magnetic nano-tweezer for interrogating mechanosensitive signaling proteins in space and time.

Spatiotemporal interrogation of signal transduction at the single-cell level is necessary to understand how extracellular cues are converted into biochemical signals and differentially regulate cellular responses. Using single-cell perturbation tools such as optogenetics, specific biochemical cues can be delivered to selective molecules or cells at any desired location and time. By measuring cellular responses to provided perturbations, investigators have decoded and deconstructed the working mechanisms of a variety of neuroelectric and biochemical signaling processes. However, analogous methods for deciphering the working mechanisms of mechanosensitive signaling by regulating mechanical inputs to cell receptors have remained elusive. To address this unmet need, we have recently developed a nanotechnology-based single-cell and single-molecule perturbation tool, termed mechanogenetics, that enables precise spatial and mechanical control over genetically encoded cell-surface receptors in live cells. This tool combines a magnetofluorescent nanoparticle (MFN) actuator, which provides precise spatial and mechanical signals to receptors via target-specific one-to-one interaction, with a micromagnetic tweezers that remotely controls the force exerted on a single nanoparticle. This chapter provides comprehensive experimental protocols of mechanogenetics consisting of four stages: (i) chemical synthesis of MFNs, (ii) bio-conjugation and purification of monovalent MFNs, (iii) establishment of cells with genetically encoded mechanosensitive proteins, and (iv) modular targeting and control of cell-surface receptors in live cells. The entire procedure takes up to 1 week. This mechanogenetic tool can be generalized to study many outstanding questions related to the dynamics of cell signaling and transcriptional control, including the mechanism of mechanically activated receptor.

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来源期刊
Methods in enzymology
Methods in enzymology 生物-生化研究方法
CiteScore
2.90
自引率
0.00%
发文量
308
审稿时长
3-6 weeks
期刊介绍: The critically acclaimed laboratory standard for almost 50 years, Methods in Enzymology is one of the most highly respected publications in the field of biochemistry. Each volume is eagerly awaited, frequently consulted, and praised by researchers and reviewers alike. Now with over 500 volumes the series contains much material still relevant today and is truly an essential publication for researchers in all fields of life sciences, including microbiology, biochemistry, cancer research and genetics-just to name a few. Five of the 2013 Nobel Laureates have edited or contributed to volumes of MIE.
期刊最新文献
Use of DNA forceps to measure receptor-ligand dissociation equilibrium constants in a single-molecule competition assay. Construction and operation of high-resolution magnetic tape head tweezers for measuring single-protein dynamics under force. Exploring the free energy landscape of proteins using magnetic tweezers. Force-fluorescence setup for observing protein-DNA interactions under load. High-speed measurements of SNARE-complexin interactions using magnetic tweezers.
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