透明细胞肾细胞癌中炎症和免疫相关基因 NOD2 的预后价值。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2024-05-01 Epub Date: 2024-03-21 DOI:10.1007/s13577-024-01045-2
Lei Lyu, Rui Min, Fuxin Zheng, Wei Xiang, Tao Huang, Yan Feng, Chuanhua Zhang, Jingdong Yuan
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引用次数: 0

摘要

炎症和免疫反应在癌症的发展和预后中起着重要作用。我们从癌症基因组图谱数据库中发现了59个上调的透明细胞肾细胞癌(ccRCC)炎症和免疫相关基因(IIRGs)。在上调的IIRGs中,核苷酸结合寡聚化结构域2(NOD2)、PYD和CARD结构域(PYCARD)也被证实在Oncomine数据库和三个独立的GEO数据集中上调。肿瘤免疫浸润资源数据库分析表明,NOD2和PYCARD水平与B细胞、CD4+ T细胞、CD8+ T细胞、中性粒细胞、巨噬细胞和树突状细胞的浸润水平呈显著正相关。多变量 Cox 危险回归分析表明,基于临床变量(年龄、性别、肿瘤分级、病理 TNM 分期),NOD2 而非 PYCARD 是一个独立的、不利于 ccRCC 预后的生物标志物。功能富集分析(GSEA)显示,NOD2参与先天性免疫反应、炎症反应和细胞因子分泌调控。同时,在四种ccRCC细胞系(786-O、ACHN、A498和Caki-1)中,NOD2的mRNA和蛋白水平均升高,敲除NOD2可显著抑制IL-8的分泌,从而抑制ccRCC细胞的增殖和侵袭。此外,研究结果表明,miR-20b-5p靶向NOD2可减轻NOD2介导的IL-8分泌。总之,NOD2是ccRCC潜在的预后生物标志物,miR-20b-5p/NOD2/IL-8轴可能调控ccRCC中炎症和免疫介导的肿瘤发生。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Prognostic value of inflammation and immune-related gene NOD2 in clear cell renal cell carcinoma.

Inflammation and immune responses play important roles in cancer development and prognosis. We identified 59 upregulated inflammation- and immune-related genes (IIRGs) in clear cell renal cell carcinoma (ccRCC) from The Cancer Genome Atlas database. Among the upregulated IIRGs, nucleotide binding oligomerization domain 2 (NOD2), PYD and CARD domain (PYCARD) were also confirmed to be upregulated in the Oncomine database and in three independent GEO data sets. Tumor immune infiltration resource database analysis revealed that NOD2 and PYCARD levels were significantly positively correlated with infiltration levels of B cells, CD4+ T cells, CD8+ T cells, neutrophils, macrophages and dendritic cells. Multivariate Cox hazards regression analysis indicated that based on clinical variables (age, gender, tumor grade, pathological TNM stage), NOD2, but not PYCARD, was an independent, unfavorable ccRCC prognostic biomarker. Functional enrichment analyses (GSEA) showed that NOD2 was involved in innate immune responses, inflammatory responses, and regulation of cytokine secretion. Meanwhile, mRNA and protein levels of NOD2 were elevated in four ccRCC cell lines (786-O, ACHN, A498 and Caki-1), and its knockdown significantly inhibited IL-8 secretion, thereby inhibiting ccRCC cell proliferation and invasion. Furthermore, results showed that miR-20b-5p targeted NOD2 to alleviate NOD2-mediated IL-8 secretion. In conclusion, NOD2 is a potential prognostic biomarker for ccRCC and the miR-20b-5p/NOD2/IL-8 axis may regulate inflammation- and immune-mediated tumorigenesis in ccRCC.

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CiteScore
7.20
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4.30%
发文量
567
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