作为同种异病生物标志物的肠道标本微生物的定性和定量组成指标(第一部分)

M. Ananieva, G. Loban', M. Faustova, Y. Chumak, S.M. Losev
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摘要

近年来,实用医学面临着各种信息的激增,这些信息突显了人体内微生物群中新微生物的出现,从而给解读实验室检测结果带来了挑战。本研究旨在让医学专业人员(包括各科医生、医科学生和实习生)全面了解当前有关人体胃肠道微生物特征的知识。我们的分析包括 53 篇文章,这些文章来自 PubMed、Scopus 和 Google Scholar 数据库收录的国际文献。这些文章是通过电子检索确定的。人类微生物组的组成受环境条件、生活环境、饮食、气候、遗传和其他各种因素的影响。出生后,微生物组形成的关键作用涉及微生物的垂直、水平和混合转移。探索常住微生物群的多样性是一项挑战,因此科学家们提出了一些生物标志物,如多样性指数、肠型和典型分类级别(属、种)的既定比率,以方便研究。在临床实践中,这些指标可作为模拟健康或疾病的微生物菌群特性的间接标记。为了解物种在不同类型中的分布情况,生态学家引入了α-、β-和γ-多样性等概念,并以不同的数学模型为基础。这些指标也被用来评估人体微生物群。科学家提出划分肠型的依据是,每个类别的系统发育(物种)组成决定了其自身的功能特征,而这很可能与长期饮食习惯有关。结论科学家利用微生物学中应用的数学模型,努力评估错综复杂的微生物组系统及其对人体的重大影响,以及菌群失调的不利影响。
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INDICATORS OF THE QUALITATIVE AND QUANTITATIVE COMPOSITION OF THE GUT COMMENSAL MICROBIOTA AS BIOMARKERS OF HOMEOSTASIS (Part 1)
In recent years, practical medicine has faced a surge of information highlighting the emergence of new microbes in the human body's microbiota, leading to challenges in interpreting laboratory test results. This study aims to equip medical professionals, including doctors of various specialties, medical students, and interns, with a comprehensive understanding of the current knowledge on the human gastrointestinal microbial profile. Our analysis included 53 articles from international literature sources indexed in PubMed, Scopus, and Google Scholar databases. These articles were identified through an electronic search. The composition of the human microbiome is shaped by alterations in environmental conditions, living environments, diet, climate, genetics, and various other factors. Following birth, the pivotal role in microbiome formation involves the vertical, horizontal, and mixed transfer of microorganisms. Navigating the diversity of resident microbiota can be challenging, leading scientists to suggest biomarkers such as diversity indices, enterotypes, and established ratios at typical taxonomic levels (genus, species) for convenience. In clinical practice, these indicators serve as indirect markers of microflora properties that model health or disease. To understand the distribution of species within types, ecologists introduced concepts like α-, β-, and γ-diversity, grounded in different mathematical models. These indicators are also employed to assess the human body microbiota. The division into enterotypes was proposed by scientists on the basis that the phylogenetic (species) composition of each category determines its own functional feature, which is likely to be related to long-term eating habits. Conclusion. Scientists endeavor to assess the intricate microbiome system and its substantial impact on the human body, as well as the adverse effects of dysbiosis, employing mathematical models applied in microbiology.
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