淡水蜗牛活动和转录组动态的昼夜节律和潮汐节律的可塑性

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC ACS Applied Electronic Materials Pub Date : 2024-03-27 DOI:10.1038/s41437-024-00680-7
Takumi Yokomizo, Yuma Takahashi
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摘要

生物具有与环境周期同步的各种生物钟,这取决于它们的栖息地。对潮汐变化的预期推动了一些海洋物种昼夜节律的进化。在淡水蜗牛 Semisulcospira reiniana 中,非潮汐区的个体表现出昼夜节律,而潮汐区的个体则同时表现出昼夜节律和环潮节律。我们研究了昼夜节律是由基因决定的,还是由环境周期诱导的。模拟潮汐周期并没有改变非潮汐区个体的昼夜节律强度。然而,潮汐种群中的蜗牛却因是否暴露于潮汐而表现出不同的活动节律。转录组分析表明,在两个种群中,由于潮汐周期的夹带作用,具有环潮振荡的基因增加了,并且主导节律性与环境周期一致。这些结果表明,两个种群基因表达的内源节律具有可塑性。需要注意的是,潮汐种群中的环潮振荡基因比非潮汐种群中的更丰富,这表明与非潮汐种群相比,潮汐种群中有更多的基因与环潮钟有关。潮汐群体中循环时钟控制基因的增加可能是由于生物钟的遗传变化或生命早期经历潮汐周期造成的。我们的研究结果表明,生物节律的可塑性可能促进了S. reiniana对潮汐环境的适应。
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Plasticity of circadian and circatidal rhythms in activity and transcriptomic dynamics in a freshwater snail
Organisms have diverse biological clocks synchronised with environmental cycles depending on their habitats. Anticipation of tidal changes has driven the evolution of circatidal rhythms in some marine species. In the freshwater snail, Semisulcospira reiniana, individuals in nontidal areas exhibit circadian rhythms, whereas those in tidal areas exhibit both circadian and circatidal rhythms. We investigated whether the circatidal rhythms are genetically determined or induced by environmental cycles. The exposure to a simulated tidal cycle did not change the intensity of circatidal rhythm in individuals in the nontidal population. However, snails in the tidal population showed different activity rhythms depending on the presence or absence of the exposure. Transcriptome analysis revealed that genes with circatidal oscillation increased due to entrainment to the tidal cycle in both populations and dominant rhythmicity was consistent with the environmental cycle. These results suggest plasticity in the endogenous rhythm in the gene expression in both populations. Note that circatidal oscillating genes were more abundant in the tidal population than in the nontidal population, suggesting that a greater number of genes are associated with circatidal clocks in the tidal population compared to the nontidal population. This increase of circatidal clock–controlled genes in the tidal population could be caused by genetic changes in the biological clock or the experience of tidal cycle in the early life stage. Our findings suggest that the plasticity of biological rhythms may have contributed to the adaptation to the tidal environment in S. reiniana.
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