抑制 HIV-1 的脉冲微分方程模型:HIV-1 RT 和 HIV-1 复制预防双重抑制剂的研究进展

IF 1.3 4区 数学 Q3 BIOLOGY Journal of Biological Systems Pub Date : 2024-03-27 DOI:10.1142/s0218339024500141
SRIJITA MONDAL, JAMES F. PETERS, PRIYANKA GHOSH, ASHIS KUMAR SARKAR, SOURAV KUMAR SASMAL
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引用次数: 0

摘要

逆转录酶(RT)和整合酶(IN)是 HIV-1 复制过程中的两种关键酶。RT 将单链病毒 RNA 基因组转化为双链 DNA,而 IN 则催化病毒双链 DNA 与宿主 DNA 的整合。目前,HIV-1 RT 和 IN 的双重抑制剂已成为抗 HIV 新药研发的热点。HIV-1 RT/IN 双抑制剂的作用与两种独立药物的作用相同。本文基于 Michaelis-Menten 酶动力学反应,建立了一个由非线性微分方程系统组成的数学模型,用于描述 HIV-1 RT/IN 催化的生化反应。在所建立的模型中,我们加入了 HIV-1 RT/IN 双抑制剂,该抑制剂同时作为非核苷类 RT 抑制剂和 IN 抑制剂发挥作用。为了研究 HIV-1 RT/IN 双抑制剂在治疗 HIV-1 感染中的疗效,我们引入了一维脉冲微分方程模型,并通过数值计算确定了应用该抑制剂的有效剂量方案。此外,我们还利用兰伯特 W 函数对脉冲微分方程模型进行了精确的闭式求解,并通过分析得到了周期解的局部稳定性。分析和数值研究得出的结果为研究使用 HIV-1 RT/IN 双抑制剂预防 HIV-1 感染的最小剂量和最高疗效提供了基本思路。
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IMPULSIVE DIFFERENTIAL EQUATION MODEL IN HIV-1 INHIBITION: ADVANCES IN DUAL INHIBITORS OF HIV-1 RT AND IN FOR THE PREVENTION OF HIV-1 REPLICATION

Reverse transcriptase (RT) and integrase (IN) are two pivotal enzymes in HIV-1 replication. RT converts the single-stranded viral RNA genome into double-stranded DNA and IN catalyzes the integration of viral double-stranded DNA into host DNA. Currently, dual inhibitors of HIV-1 RT and IN have become a hotspot in new anti-HIV drug research and development. A dual inhibitor of HIV-1 RT/IN does the same thing as the two independent drugs would do. In this paper, we develop a mathematical model comprising a system of nonlinear differential equations describing HIV-1 RT/IN catalyzed biochemical reactions based on Michaelis–Menten enzyme kinetic reaction. In the formulated model we incorporate HIV-1 RT/IN dual inhibitor which simultaneously works as a non-nucleoside RT inhibitor and IN inhibitor. To examine the efficacy of HIV-1 RT/IN dual inhibitor in the treatment of HIV-1 infection, we have introduced a one-dimensional impulsive differential equation model and determined an effective dosing regimen for applying the inhibitor numerically. Furthermore, the exact closed form solution of the impulsive differential equation model is carried out by using the Lambert W function and the local stability of the periodic solution is also obtained analytically. The results obtained from analytical as well as numerical studies provide a basic idea to investigate the minimum dose with the highest efficacy for administering HIV-1 RT/IN dual inhibitors to prevent HIV-1 infection.

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来源期刊
CiteScore
2.80
自引率
12.50%
发文量
31
审稿时长
1 months
期刊介绍: The Journal of Biological Systems is published quarterly. The goal of the Journal is to promote interdisciplinary approaches in Biology and in Medicine, and the study of biological situations with a variety of tools, including mathematical and general systems methods. The Journal solicits original research papers and survey articles in areas that include (but are not limited to): Complex systems studies; isomorphies; nonlinear dynamics; entropy; mathematical tools and systems theories with applications in Biology and Medicine. Interdisciplinary approaches in Biology and Medicine; transfer of methods from one discipline to another; integration of biological levels, from atomic to molecular, macromolecular, cellular, and organic levels; animal biology; plant biology. Environmental studies; relationships between individuals, populations, communities and ecosystems; bioeconomics, management of renewable resources; hierarchy theory; integration of spatial and time scales. Evolutionary biology; co-evolutions; genetics and evolution; branching processes and phyllotaxis. Medical systems; physiology; cardiac modeling; computer models in Medicine; cancer research; epidemiology. Numerical simulations and computations; numerical study and analysis of biological data. Epistemology; history of science. The journal will also publish book reviews.
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