Amadeus M. Gebauer, Martin R. Pfaller, Jason M. Szafron, Wolfgang A. Wall
{"title":"器官尺度生长和重塑受限混合模型中历史变量的自适应整合","authors":"Amadeus M. Gebauer, Martin R. Pfaller, Jason M. Szafron, Wolfgang A. Wall","doi":"arxiv-2404.09706","DOIUrl":null,"url":null,"abstract":"In the last decades, many computational models have been developed to predict\nsoft tissue growth and remodeling (G&R). The constrained mixture theory\ndescribes fundamental mechanobiological processes in soft tissue G&R and has\nbeen widely adopted in cardiovascular models of G&R. However, even after two\ndecades of work, large organ-scale models are rare, mainly due to high\ncomputational costs (model evaluation and memory consumption), especially in\nlong-range simulations. We propose two strategies to adaptively integrate\nhistory variables in constrained mixture models to enable large organ-scale\nsimulations of G&R. Both strategies exploit that the influence of deposited\ntissue on the current mixture decreases over time through degradation. One\nstrategy is independent of external loading, allowing the estimation of the\ncomputational resources ahead of the simulation. The other adapts the history\nsnapshots based on the local mechanobiological environment so that the\nadditional integration errors can be controlled and kept negligibly small, even\nin G&R scenarios with severe perturbations. We analyze the adaptively\nintegrated constrained mixture model on a tissue patch for a parameter study\nand show the performance under different G&R scenarios. To confirm that\nadaptive strategies enable large organ-scale examples, we show simulations of\ndifferent hypertension conditions with a real-world example of a biventricular\nheart discretized with a finite element mesh. In our example, adaptive\nintegrations sped up simulations by a factor of three and reduced memory\nrequirements to one-sixth. The reduction of the computational costs gets even\nmore pronounced for simulations over longer periods. Adaptive integration of\nthe history variables allows studying more finely resolved models and longer\nG&R periods while computational costs are drastically reduced and largely\nconstant in time.","PeriodicalId":501572,"journal":{"name":"arXiv - QuanBio - Tissues and Organs","volume":"30 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Adaptive integration of history variables in constrained mixture models for organ-scale growth and remodeling\",\"authors\":\"Amadeus M. Gebauer, Martin R. Pfaller, Jason M. Szafron, Wolfgang A. Wall\",\"doi\":\"arxiv-2404.09706\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"In the last decades, many computational models have been developed to predict\\nsoft tissue growth and remodeling (G&R). The constrained mixture theory\\ndescribes fundamental mechanobiological processes in soft tissue G&R and has\\nbeen widely adopted in cardiovascular models of G&R. However, even after two\\ndecades of work, large organ-scale models are rare, mainly due to high\\ncomputational costs (model evaluation and memory consumption), especially in\\nlong-range simulations. We propose two strategies to adaptively integrate\\nhistory variables in constrained mixture models to enable large organ-scale\\nsimulations of G&R. Both strategies exploit that the influence of deposited\\ntissue on the current mixture decreases over time through degradation. One\\nstrategy is independent of external loading, allowing the estimation of the\\ncomputational resources ahead of the simulation. The other adapts the history\\nsnapshots based on the local mechanobiological environment so that the\\nadditional integration errors can be controlled and kept negligibly small, even\\nin G&R scenarios with severe perturbations. We analyze the adaptively\\nintegrated constrained mixture model on a tissue patch for a parameter study\\nand show the performance under different G&R scenarios. To confirm that\\nadaptive strategies enable large organ-scale examples, we show simulations of\\ndifferent hypertension conditions with a real-world example of a biventricular\\nheart discretized with a finite element mesh. In our example, adaptive\\nintegrations sped up simulations by a factor of three and reduced memory\\nrequirements to one-sixth. The reduction of the computational costs gets even\\nmore pronounced for simulations over longer periods. Adaptive integration of\\nthe history variables allows studying more finely resolved models and longer\\nG&R periods while computational costs are drastically reduced and largely\\nconstant in time.\",\"PeriodicalId\":501572,\"journal\":{\"name\":\"arXiv - QuanBio - Tissues and Organs\",\"volume\":\"30 1\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-04-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"arXiv - QuanBio - Tissues and Organs\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/arxiv-2404.09706\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"arXiv - QuanBio - Tissues and Organs","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/arxiv-2404.09706","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
Adaptive integration of history variables in constrained mixture models for organ-scale growth and remodeling
In the last decades, many computational models have been developed to predict
soft tissue growth and remodeling (G&R). The constrained mixture theory
describes fundamental mechanobiological processes in soft tissue G&R and has
been widely adopted in cardiovascular models of G&R. However, even after two
decades of work, large organ-scale models are rare, mainly due to high
computational costs (model evaluation and memory consumption), especially in
long-range simulations. We propose two strategies to adaptively integrate
history variables in constrained mixture models to enable large organ-scale
simulations of G&R. Both strategies exploit that the influence of deposited
tissue on the current mixture decreases over time through degradation. One
strategy is independent of external loading, allowing the estimation of the
computational resources ahead of the simulation. The other adapts the history
snapshots based on the local mechanobiological environment so that the
additional integration errors can be controlled and kept negligibly small, even
in G&R scenarios with severe perturbations. We analyze the adaptively
integrated constrained mixture model on a tissue patch for a parameter study
and show the performance under different G&R scenarios. To confirm that
adaptive strategies enable large organ-scale examples, we show simulations of
different hypertension conditions with a real-world example of a biventricular
heart discretized with a finite element mesh. In our example, adaptive
integrations sped up simulations by a factor of three and reduced memory
requirements to one-sixth. The reduction of the computational costs gets even
more pronounced for simulations over longer periods. Adaptive integration of
the history variables allows studying more finely resolved models and longer
G&R periods while computational costs are drastically reduced and largely
constant in time.