加利福尼亚洋流系统中异养细菌的铁限制跟踪有机碳和铁的相对供应情况

Lauren E Manck, Tyler H Coale, Brandon M Stephens, Kiefer O Forsch, Lihini I Aluwihare, Christopher L Dupont, Andrew E Allen, Katherine A Barbeau
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摘要

铁是海洋环境中所有微生物的必需营养元素。在全球大部分表层海洋中,铁对初级生产的限制已被充分记录,但对海洋异养微生物群落铁限制的潜在性却知之甚少。在这项研究中,我们描述了加州洋流系统(一个东部边界上升流系统)中异养细菌群落对铁添加的转录组反应,以检测异养细菌的原位铁胁迫。在高生产力条件下,碳限制得到缓解,但铁供应量仍然很低时,检测到异养细菌对铁供应量的基因表达变化。在该系统中,颗粒有机碳与溶解铁的比率可作为异养细菌铁限制的生物地球化学代用指标。铁胁迫的特征是铁运输途径的高表达水平和参与碳代谢的含铁酶的低表达水平,而异养性细菌对铁的需求大部分来自碳代谢。在铁添加实验中确定的铁胁迫生物标志物的表达也在原位被检测到。这些结果表明,铁的可用性将影响异养细菌对有机物的处理,并可能对海洋生物碳泵产生影响。
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Iron limitation of heterotrophic bacteria in the California current system tracks relative availability of organic carbon and iron
Iron is an essential nutrient for all microorganisms in the marine environment. Iron limitation of primary production has been well documented across a significant portion of the global surface ocean, but much less is known regarding the potential for iron limitation of the marine heterotrophic microbial community. In this work, we characterize the transcriptomic response of the heterotrophic bacterial community to iron additions in the California Current System, an eastern boundary upwelling system, to detect in situ iron stress of heterotrophic bacteria. Changes in gene expression in response to iron availability by heterotrophic bacteria were detected under conditions of high productivity when carbon limitation was relieved but when iron availability remained low. The ratio of particulate organic carbon to dissolved iron emerged as a biogeochemical proxy for iron limitation of heterotrophic bacteria in this system. Iron stress was characterized by high expression levels of iron transport pathways and decreased expression of iron-containing enzymes involved in carbon metabolism, where a majority of the heterotrophic bacterial iron requirement resides. Expression of iron stress biomarkers, as identified in the iron-addition experiments, was also detected in situ. These results suggest iron availability will impact the processing of organic matter by heterotrophic bacteria with potential consequences for the marine biological carbon pump.
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