Drivers of plant parasitic nematode community structures associated with tobacco-growing areas in southern Brazil

Tobacco (Nicotiana tabacum L.) is one of the most important crops in southern Brazil, but little is known about the distribution and diversity of plant parasitic nematodes (PPNs). We surveyed the occurrence and diversity of PPNs in 36 tobacco-growing areas in southern Brazil as well as evaluated their relationship with 19 bioclimatic variables. For these purposes, extracted nematodes (from soil and roots) were identified based on morphological and biochemical traits and estimates of incidence and abundance were obtained, which were used to compute diversity indices. Furthermore, the relationship between taxa and diversity and the influence of bioclimatic variables were studied using principal component analysis (PCA) and generalized linear models (GLMs), respectively. We observed diversity across the sampled sites, with values varying from 0.03 to 1.22 and from 0.05 to 0.76 according to the Shannon-Wiener and Pielou's evenness indices, respectively. Seven genera of PPNs (Meloidogyne, Helicotylenchus, Tylenchus, Xiphinema, Pratylenchus, Paratylenchus and Mesocriconema) were identified, highlighting taxa with high incidence and abundance, such as Meloidogyne (100%; 1800 to 41,850 specimens/250 cm³), Helicotylenchus (100%; 50 to 9850 specimens/250 cm³), and Pratylenchus (86.1%; 50 to 1950 specimens/250 cm³). The PCA disclosed the major roles of Meloidogyne, Tylenchus, and Helicotylenchus in the structure of the PPN communities and their interplays. Among root-knot nematodes, Meloidogyne javanica, M. arenaria and M. incognita were the predominant species. Using GLMs, we found that average annual temperature and annual precipitation strongly influenced the abundance of PPNs as well as the diversity indices (p < .01), with negative and/or positive interactions. Collectively, our findings fill gaps in knowledge about the current impact of PPNs and provide insights into future scenarios, including for other host crops.