经典安古环素与 C 环裂解安古环素的分化:阐明 Lugdunomycin 和 Thioangucycline 生物合成的早期修饰步骤。

IF 3.5 2区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY ACS Chemical Biology Pub Date : 2024-04-26 DOI:10.1021/acschembio.4c00082
Aleksi Nuutila, Xiansha Xiao, Helga U. van der Heul, Gilles P. van Wezel, Pedro Dinis, Somayah S. Elsayed and Mikko Metsä-Ketelä*, 
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引用次数: 0

摘要

安格环素是一类重要的微生物天然产物,具有极大的化学多样性。经典的安格环类由四环苯并[a]蒽支架组成,其中一个环以一定角度连接。然而,在非典型安格列环化合物中,多芳香族苷元在 A 环、B 环或 C 环上被裂解,从而导致结构重排,使化学性质进一步多样化。在此,我们阐明了安格环素生物合成过程中的分支点,这些分支点导致了鲁格多霉素和硫代安格环素生物合成过程中 C 环的裂解。我们发现,UWM6 的 12-羟基化和 6-酮还原是经典和 C 环裂解安格环素途径中的共同步骤,尽管双功能 6-酮还原酶 LugOIIred 还具有额外的独特 1-酮还原酶活性。我们确定 LugN 甲基转移酶形成的关键中间体 8-O-甲基四环霉素是 C 环裂解安格环素的分支点。鲁格多霉素和硫代安古环素生物合成的最后一个共同步骤是醌还原,分别由 7-酮还原酶 LugG 和 TacO 催化。反过来,硫代安古环素的第一步是由 TacA 催化的 12-酮还原,而鲁丁霉素途径中不存在与 TacA 同源的蛋白质。我们的研究结果证实,醌还原是早期的修饰步骤,因此可能对随后的 C 环裂解具有重要的机理作用。最后,许多剪裁酶都具有广泛的底物杂合性,我们利用这种杂合性进行组合酶合成,生成了血管环素 SM 196 A 和氢化霉素。我们认为,酶的杂合性和许多酶对相同底物的竞争导致了一个分支生物合成网络,并形成了许多典型的血管环素分流产物,而不是典型的线性代谢途径。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

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Divergence of Classical and C-Ring-Cleaved Angucyclines: Elucidation of Early Tailoring Steps in Lugdunomycin and Thioangucycline Biosynthesis

Angucyclines are an important group of microbial natural products that display tremendous chemical diversity. Classical angucyclines are composed of a tetracyclic benz[a]anthracene scaffold with one ring attached at an angular orientation. However, in atypical angucyclines, the polyaromatic aglycone is cleaved at A-, B-, or C-rings, leading to structural rearrangements and enabling further chemical variety. Here, we have elucidated the branching points in angucycline biosynthesis leading toward cleavage of the C-ring in lugdunomycin and thioangucycline biosynthesis. We showed that 12-hydroxylation and 6-ketoreduction of UWM6 are shared steps in classical and C-ring-cleaved angucycline pathways, although the bifunctional 6-ketoreductase LugOIIred harbors additional unique 1-ketoreductase activity. We identified formation of the key intermediate 8-O-methyltetrangomycin by the LugN methyltransferase as the branching point toward C-ring-cleaved angucyclines. The final common step in lugdunomycin and thioangucycline biosynthesis is quinone reduction, catalyzed by the 7-ketoreductases LugG and TacO, respectively. In turn, the committing step toward thioangucyclines is 12-ketoreduction catalyzed by TacA, for which no orthologous protein exists on the lugdunomycin pathway. Our results confirm that quinone reductions are early tailoring steps and, therefore, may be mechanistically important for subsequent C-ring cleavage. Finally, many of the tailoring enzymes harbored broad substrate promiscuity, which we utilized in combinatorial enzymatic syntheses to generate the angucyclines SM 196 A and hydranthomycin. We propose that enzyme promiscuity and the competition of many of the enzymes for the same substrates lead to a branching biosynthetic network and formation of numerous shunt products typical for angucyclines rather than a canonical linear metabolic pathway.

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来源期刊
ACS Chemical Biology
ACS Chemical Biology 生物-生化与分子生物学
CiteScore
7.50
自引率
5.00%
发文量
353
审稿时长
3.3 months
期刊介绍: ACS Chemical Biology provides an international forum for the rapid communication of research that broadly embraces the interface between chemistry and biology. The journal also serves as a forum to facilitate the communication between biologists and chemists that will translate into new research opportunities and discoveries. Results will be published in which molecular reasoning has been used to probe questions through in vitro investigations, cell biological methods, or organismic studies. We welcome mechanistic studies on proteins, nucleic acids, sugars, lipids, and nonbiological polymers. The journal serves a large scientific community, exploring cellular function from both chemical and biological perspectives. It is understood that submitted work is based upon original results and has not been published previously.
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