对磷饥饿耐受性 1(PSTOL1)基因的结构和功能特性进行的分子内分析

IF 3 2区 农林科学 Q1 AGRONOMY TURKISH JOURNAL OF AGRICULTURE AND FORESTRY Pub Date : 2024-04-01 DOI:10.55730/1300-011x.3172
Quratulain Mehdi Khan, Muhammad Aqeel, Maryam Murtaza, Wajya Ajmal, Muhammad Uzair, S. Fiaz, Kotb A. Attia, A. Abushady, Itoh Kimiko, Muhammad Ramzan Khan, Ghulam Muhammad Ali
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引用次数: 0

摘要

:磷是所有生物细胞所需的重要宏量元素,在农业生产系统中至关重要,优良品种的农作物需要大量的磷来维持产量。全世界约有 70% 的耕地缺磷,据最近的估计,到本世纪末,全世界的磷资源将被消耗殆尽,因此更有必要开发磷效率高的作物。对于育种者和农民来说,更深入地了解植物如何在磷供应量较低的情况下保持产量是非常有必要的。在这项研究中,我们重点研究了磷饥饿耐受性 1(PSTOL1)基因,已知该基因参与促进早期根系生长,从而使植物在缺磷土壤中获得更多的磷和其他养分,提高谷物产量。由于目前还没有关于 PSTOL1 基因结构和功能的报道,该项目面临着一系列不同的机遇和挑战,需要采用不同的方法来模拟 PSTOL1 与磷吸收 1(PUP1)基因之间的相互作用。本文介绍了 PSTOL1 的建模、对接和模拟,以检查蛋白质的稳定性及其随时间变化的行为。研究还确定了蛋白质的理化性质,构建了系统发生树以寻找其进化关系,并分析了保守结构域以进行功能注释。该研究表明,利用结构生物信息学方法推进 PSTOL1 介导的磷吸收 1(PUP1)信号级联是小麦抗磷饥饿的有效生物机制。
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In-silico analysis for Structural and Functional Characterization of Phosphorus-Starvation Tolerance 1 (PSTOL1) Gene
: As an important macro element for all living cells, phosphorus is essential in agricultural production systems and is required in large quantities by elite varieties of crops to maintain yields. Approximately 70% of the worldwide cultivated land suffers from phosphorous deficiency, and it has recently been estimated that the worldwide phosphorous resources will be shattered by the end of this century, thereby increasing the need to develop phosphorus-efficient crops. A greater understanding of how plants can maintain yield with lower phosphorous availability is highly desirable to both breeders and farmers. For this research, we focused on the phosphorus-starvation tolerance 1 ( PSTOL1 ) gene, which is known to be involved in enhancing early root growth, thereby enabling plants to acquire more phosphorus and other nutrients and enhancing grain yield in phosphorus-deficient soil. As there is no reported structure and function of the PSTOL1 gene, this project involves a distinct set of opportunities and challenges and requires different approaches to model the interaction between PSTOL1 and the gene phosphorous uptake 1 ( PUP1 ). This article covers the modeling, docking, and simulation of PSTOL1 to check the protein stability and its behavior over time. The physiochemical properties were ascertained, a phylogenetic tree was constructed to find the evolutionary relationship, and the conserved domains were analyzed for functional annotation. This study reports that the advancement of the PSTOL1 -mediated phosphorous uptake 1 ( PUP1 ) signaling cascade using structural bioinformatics is a potent biological mechanism against phosphorous starvation in wheat.
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来源期刊
CiteScore
4.20
自引率
6.90%
发文量
42
审稿时长
12 months
期刊介绍: The Turkish Journal of Agriculture and Forestry is published electronically 6 times a year by the Scientific and Technological Research Council of Turkey (TÜBİTAK). It publishes, in English, full-length original research papers and solicited review articles on advances in agronomy, horticulture, plant breeding, plant protection, plant molecular biology and biotechnology, soil science and plant nutrition, bionergy and energy crops, irrigation, agricultural technologies, plant-based food science and technology, forestry, and forest industry products.
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