{"title":"甘蓝型油菜 CYP450 酶的基因组鉴定及其对多种非生物胁迫反应的新认识","authors":"Haili Song, Yingpeng Hua, Ting Zhou, Caipeng Yue, JinYong Huang, Yingna Feng","doi":"10.1007/s11105-024-01448-3","DOIUrl":null,"url":null,"abstract":"<p>Cytochrome P450 (CYP450) proteins are a large group of monooxygenase that play important roles in the biosynthesis of secondary metabolites and degradation of xenobiotics. However, the responses of CYP450 family to abiotic stresses have not been characterized in <i>Brassica napus</i> (<i>B. napus</i>). In this study, we identified a total of 384 CYP450 genes in Darmor-<i>bzh</i>, the rapeseed culture whose genome was wildly used as a reference for gene clone. The structure and localization analyses showed that <i>BnaCYP450</i> genes have integrated heme-binding motif, contain 1–10 exons, unevenly distributed across all the 19 chromosomes, and mainly localized on chloroplast. Cis-regulation element analysis suggested that <i>BnaCYP450</i> genes were transcriptionally regulated by hormone and multiple stress response signals. Transcript expression analyses identified 108, 85, 96, and 86 <i>BnaCYP450s</i> differentially expressed genes (DEGs) in response to salt stress, potassium deficiency, nitrogen stress, and cadmium toxicity, respectively. Gene ontology (GO) enrichment analysis indicated that these <i>BnaCYP450</i> DEGs mainly enriched in molecular function of ion binding and oxidoreductase activity and the biological process of secondary product metabolism. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that they mainly involved in the pathway of isoflavonoid biosynthesis. Differential expression of <i>BnaCYP450s</i> to multiple abiotic stresses revealed the functional diversity of BnaCYP450 family in <i>B. napus</i>. This study gave a basic understanding of <i>CYP450</i> genes in <i>B. napus</i> and provides multiple core <i>BnaCYP450</i> genetic resources for improving plant resistance to multiple abiotic stresses.</p>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2024-04-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genomic Identification of CYP450 Enzymes and New Insights into Their Response to Diverse Abiotic Stresses in Brassica napus\",\"authors\":\"Haili Song, Yingpeng Hua, Ting Zhou, Caipeng Yue, JinYong Huang, Yingna Feng\",\"doi\":\"10.1007/s11105-024-01448-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Cytochrome P450 (CYP450) proteins are a large group of monooxygenase that play important roles in the biosynthesis of secondary metabolites and degradation of xenobiotics. However, the responses of CYP450 family to abiotic stresses have not been characterized in <i>Brassica napus</i> (<i>B. napus</i>). In this study, we identified a total of 384 CYP450 genes in Darmor-<i>bzh</i>, the rapeseed culture whose genome was wildly used as a reference for gene clone. The structure and localization analyses showed that <i>BnaCYP450</i> genes have integrated heme-binding motif, contain 1–10 exons, unevenly distributed across all the 19 chromosomes, and mainly localized on chloroplast. Cis-regulation element analysis suggested that <i>BnaCYP450</i> genes were transcriptionally regulated by hormone and multiple stress response signals. Transcript expression analyses identified 108, 85, 96, and 86 <i>BnaCYP450s</i> differentially expressed genes (DEGs) in response to salt stress, potassium deficiency, nitrogen stress, and cadmium toxicity, respectively. Gene ontology (GO) enrichment analysis indicated that these <i>BnaCYP450</i> DEGs mainly enriched in molecular function of ion binding and oxidoreductase activity and the biological process of secondary product metabolism. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that they mainly involved in the pathway of isoflavonoid biosynthesis. Differential expression of <i>BnaCYP450s</i> to multiple abiotic stresses revealed the functional diversity of BnaCYP450 family in <i>B. napus</i>. This study gave a basic understanding of <i>CYP450</i> genes in <i>B. napus</i> and provides multiple core <i>BnaCYP450</i> genetic resources for improving plant resistance to multiple abiotic stresses.</p>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2024-04-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s11105-024-01448-3\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s11105-024-01448-3","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
Genomic Identification of CYP450 Enzymes and New Insights into Their Response to Diverse Abiotic Stresses in Brassica napus
Cytochrome P450 (CYP450) proteins are a large group of monooxygenase that play important roles in the biosynthesis of secondary metabolites and degradation of xenobiotics. However, the responses of CYP450 family to abiotic stresses have not been characterized in Brassica napus (B. napus). In this study, we identified a total of 384 CYP450 genes in Darmor-bzh, the rapeseed culture whose genome was wildly used as a reference for gene clone. The structure and localization analyses showed that BnaCYP450 genes have integrated heme-binding motif, contain 1–10 exons, unevenly distributed across all the 19 chromosomes, and mainly localized on chloroplast. Cis-regulation element analysis suggested that BnaCYP450 genes were transcriptionally regulated by hormone and multiple stress response signals. Transcript expression analyses identified 108, 85, 96, and 86 BnaCYP450s differentially expressed genes (DEGs) in response to salt stress, potassium deficiency, nitrogen stress, and cadmium toxicity, respectively. Gene ontology (GO) enrichment analysis indicated that these BnaCYP450 DEGs mainly enriched in molecular function of ion binding and oxidoreductase activity and the biological process of secondary product metabolism. Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analysis showed that they mainly involved in the pathway of isoflavonoid biosynthesis. Differential expression of BnaCYP450s to multiple abiotic stresses revealed the functional diversity of BnaCYP450 family in B. napus. This study gave a basic understanding of CYP450 genes in B. napus and provides multiple core BnaCYP450 genetic resources for improving plant resistance to multiple abiotic stresses.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.