线粒体相关基因 SLC25A32 作为新型预后和免疫治疗生物标记物:从泛癌多组学分析到乳腺癌验证

IF 2.6 4区 医学 Q3 CELL BIOLOGY Analytical Cellular Pathology Pub Date : 2024-04-29 DOI:10.1155/2024/1373659
Shiqi Zuo, Siyuan He, Zhiqin Zhu, Yingying Zhang, Yanjie Hou, Ziqing Wu, Yao Tang
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引用次数: 0

摘要

背景。人类 SLC25A32 基因突变会导致迟发性运动不耐受,并与多种神经和代谢疾病相关。然而,由于缺乏对泛癌症中 SLC25A32 的多组学综合分析,人们对其在肿瘤发生中的具体作用机制知之甚少。方法。我们使用多种分析工具全面研究了 SLC25A32 的转录、蛋白水平和启动子甲基化。此外,我们还利用 GSCA 和 cBioPortal 数据库评估了 SLC25A32 在泛癌症中的遗传影响和表观遗传学改变。利用UCSCXenaShiny和GEPIA2.0平台比较了SLC25A32在多种癌症中的表达和拷贝数改变的预后意义,并通过实验验证了它在乳腺癌中的特异功能。结果发现在大多数癌症类型中,SLC25A32在转录和蛋白水平上异常表达,在大多数肿瘤中DNA启动子甲基化异常,基因显著扩增。SLC25A32 与某些癌症的生存预后、免疫浸润细胞、肿瘤干性和免疫相关标记物有明显关联。敲除 SLC25A32 可减少乳腺肿瘤细胞的增殖、侵袭和转移。结论这项研究旨在揭示 SLC25A32 作为一种新型预后生物标记物对泛癌症预测和免疫疗法疗效的作用,并具体描述了它在乳腺癌中的潜在作用机制。SLC25A32在泛癌症中广泛差异表达,具有预后意义,并与免疫浸润相关。此外,它还会影响乳腺癌的发生和发展。
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Mitochondria-Associated Gene SLC25A32 as a Novel Prognostic and Immunotherapy Biomarker: From Pan-Cancer Multiomics Analysis to Breast Cancer Validation
Background. Mutations in SLC25A32 in humans cause late-onset exercise intolerance, which is associated with various neurological and metabolic diseases. However, its specific mechanism of action in tumour development is poorly understood owing to the lack of multiomics integrated analysis of SLC25A32 in pan-cancer. Methods. We used various analytical tools to comprehensively investigate the transcription, protein level, and promoter methylation of SLC25A32. Furthermore, the GSCA and cBioPortal databases were used to evaluate the inheritance impact and epigenetic alterations of SLC25A32 in pan-cancer. SLC25A32 expression and the prognostic significance of copy number alterations in multiple cancers were compared using the UCSCXenaShiny and GEPIA2.0 platforms, and its specific function in breast cancer was experimentally verified. Results. SLC25A32 is abnormally expressed at the transcriptional and protein levels in most cancer types, with aberrant DNA promoter methylation and significant gene amplification in most tumours. SLC25A32 is significantly associated with the survival prognosis of some cancers, immune infiltrating cells, tumour stemness, and immune-related markers. SLC25A32 knockdown decreased breast tumour cell proliferation, invasion, and metastasis. Conclusions. This study aimed to reveal SLC25A32 as a novel prognostic biomarker for pan-cancer prediction and immunotherapy efficacy and specifically describes its underlying mechanism of action in breast cancer. SLC25A32 is widely differentially expressed in pan-cancer with prognostic significance and is correlated with immune infiltration. Additionally, it can affect breast cancer occurrence and development.
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来源期刊
Analytical Cellular Pathology
Analytical Cellular Pathology ONCOLOGY-CELL BIOLOGY
CiteScore
4.90
自引率
3.10%
发文量
70
审稿时长
16 weeks
期刊介绍: Analytical Cellular Pathology is a peer-reviewed, Open Access journal that provides a forum for scientists, medical practitioners and pathologists working in the area of cellular pathology. The journal publishes original research articles, review articles, and clinical studies related to cytology, carcinogenesis, cell receptors, biomarkers, diagnostic pathology, immunopathology, and hematology.
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