硫循环可能掩盖了当代甲烷渗漏环境中由生物驱动的动态铁氧化还原循环

IF 3.6 4区 生物学 Q2 ENVIRONMENTAL SCIENCES Environmental Microbiology Reports Pub Date : 2024-05-05 DOI:10.1111/1758-2229.13263
Isabel R. Baker, Peter R. Girguis
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引用次数: 0

摘要

深海甲烷渗漏是地球上生物生产力最高的环境之一,其特点通常是稳定的低氧浓度和微生物群落,它们将甲烷的厌氧氧化与底层沉积物中的硫酸盐还原或铁还原结合起来。在这些地点,亚铁(Fe2+)可通过有机碎屑铁还原、甲烷营养体耦合铁还原或通过这些地点丰富的硫酸盐还原菌产生的硫化物的非生物还原产生。缺氧沉积物中普遍存在的 Fe2+,以及上覆水体中的氧气,都表明渗漏区也可能存在铁氧化微生物群落。然而,鉴于硫化物与亚铁之间的非生物反应通常被认为会以不溶性硫化铁和黄铁矿的形式清除所有亚铁,因此尚不清楚在多大程度上 Fe2+ 仍可被生物利用并保持在溶液中。因此,我们在卡斯卡迪亚边缘的甲烷渗漏点的海底寻找微需氧、嗜中性铁氧化细菌,我们的推理是,如果能从这些环境中分离出铁氧化细菌,则表明孔隙水中的 Fe2+ 能持续足够长的时间,从而使生物作用超越黄铁矿化作用。我们发现,富集培养基中硫酸盐的存在削弱了微生物驱动的铁氧化作用,大部分铁以硫化铁的形式沉淀下来。相对于非生物对照和含硫酸盐的培养物,将富集培养物转移到硫酸盐贫化的培养基中会导致动态的铁氧化还原循环,并证明了甲烷渗漏衍生群落产生生物铁(氧氢)氧化物的能力。16S rRNA 分析表明,去除硫酸盐会大大降低富集培养物的多样性,并导致生态系统从以 Gammaproteobacteria 为主转变为以 Rhodobacteraceae(Alphaproteobacteria)为主。我们的数据表明,在大多数情况下,硫循环可能会通过适应硫的沉积物栖息生态系统及其影响的非生物反应,限制当代环境中的生物 "铁轮"。
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Sulfur cycling likely obscures dynamic biologically-driven iron redox cycling in contemporary methane seep environments

Deep-sea methane seeps are amongst the most biologically productive environments on Earth and are often characterised by stable, low oxygen concentrations and microbial communities that couple the anaerobic oxidation of methane to sulfate reduction or iron reduction in the underlying sediment. At these sites, ferrous iron (Fe2+) can be produced by organoclastic iron reduction, methanotrophic-coupled iron reduction, or through the abiotic reduction by sulfide produced by the abundant sulfate-reducing bacteria at these sites. The prevalence of Fe2+in the anoxic sediments, as well as the availability of oxygen in the overlying water, suggests that seeps could also harbour communities of iron-oxidising microbes. However, it is unclear to what extent Fe2+ remains bioavailable and in solution given that the abiotic reaction between sulfide and ferrous iron is often assumed to scavenge all ferrous iron as insoluble iron sulfides and pyrite. Accordingly, we searched the sea floor at methane seeps along the Cascadia Margin for microaerobic, neutrophilic iron-oxidising bacteria, operating under the reasoning that if iron-oxidising bacteria could be isolated from these environments, it could indicate that porewater Fe2+ can persist is long enough for biology to outcompete pyritisation. We found that the presence of sulfate in our enrichment media muted any obvious microbially-driven iron oxidation with most iron being precipitated as iron sulfides. Transfer of enrichment cultures to sulfate-depleted media led to dynamic iron redox cycling relative to abiotic controls and sulfate-containing cultures, and demonstrated the capacity for biogenic iron (oxyhydr)oxides from a methane seep-derived community. 16S rRNA analyses revealed that removing sulfate drastically reduced the diversity of enrichment cultures and caused a general shift from a Gammaproteobacteria-domainated ecosystem to one dominated by Rhodobacteraceae (Alphaproteobacteria). Our data suggest that, in most cases, sulfur cycling may restrict the biological “ferrous wheel” in contemporary environments through a combination of the sulfur-adapted sediment-dwelling ecosystems and the abiotic reactions they influence.

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来源期刊
Environmental Microbiology Reports
Environmental Microbiology Reports ENVIRONMENTAL SCIENCES-MICROBIOLOGY
CiteScore
6.00
自引率
3.00%
发文量
91
审稿时长
3.0 months
期刊介绍: The journal is identical in scope to Environmental Microbiology, shares the same editorial team and submission site, and will apply the same high level acceptance criteria. The two journals will be mutually supportive and evolve side-by-side. Environmental Microbiology Reports provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following: the structure, activities and communal behaviour of microbial communities microbial community genetics and evolutionary processes microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors microbes in the tree of life, microbial diversification and evolution population biology and clonal structure microbial metabolic and structural diversity microbial physiology, growth and survival microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors modelling and theory development pollution microbiology extremophiles and life in extreme and unusual little-explored habitats element cycles and biogeochemical processes, primary and secondary production microbes in a changing world, microbially-influenced global changes evolution and diversity of archaeal and bacterial viruses new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens.
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