Lichai Yuan, Yang Ni, Jingling Li, Heyu Yang, Jingwen Yue, Xinyi Zhang, Chang Zhang, Haimei Chen, Chang Liu
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The observed structure had a characteristic quadripartite arrangement, comprising a substantial single-copy section, a smaller single-copy region, and a pair of inverted repeat regions, measuring 82,451 bp, 18,423 bp, and 24,950 bp in length, respectively. The genome has been shown to have 109 distinct genes, comprising 79 protein-coding genes, four rRNA genes, and 26 tRNA genes. The chloroplast genome of <i>I. britannica</i> was found to have 49 lengthy repetitive sequences and 69 simple sequence repeats. The findings of the phylogenetic analysis revealed a significant correlation among <i>I. britannica</i>, <i>I. janopinca</i>, and <i>I. linariifolia</i>, followed by <i>I. hupehensis</i>. Our proposal suggests that “<i>Inula britannica</i>” is a more appropriate label for this particular species than “<i>Pentanema britannicum</i>.” Combining the K2p, ecorPrimers, and DNA polymorphic analysis results, eight regions can be distinguished from four <i>Inula</i> species after PCR and sangger sequencing. The reconstruction of ancestral character states revealed a series of changes from long spurs to alternative petal forms in the <i>Inula</i> species. The investigation of divergence time revealed that <i>Inula</i> underwent diversification during the late Pliocene period, specifically around 3.245 Mya. 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引用次数: 0
摘要
茵陈是菊科植物中一个重要的植物品种。这种植物的干燥头状花序被用作传统的中草药,具有治疗水肿、减轻恶心和防止呕吐的功效。Inula britannica 的正式名称是 Pentanema britannicum。本研究从头构建了 I. britannica 的全叶绿体基因组。对其基因组特征进行了评估,随后将其与五个 Inula 物种的基因组特征进行了比较。I. britannica的叶绿体基因组长度为150,774个碱基对。观察到的结构具有特征性的四方排列,包括一个较大的单拷贝区、一个较小的单拷贝区和一对倒位重复区,长度分别为 82,451 bp、18,423 bp 和 24,950 bp。该基因组有 109 个不同的基因,包括 79 个蛋白质编码基因、4 个 rRNA 基因和 26 个 tRNA 基因。发现 I. britannica 的叶绿体基因组有 49 个冗长重复序列和 69 个简单序列重复。系统进化分析结果显示,I. britannica、I. janopinca 和 I. linariifolia 之间存在显著的相关性,其次是 I. hupehensis。我们的建议表明,"Inula britannica "比 "Pentanema britannicum "更适合这一特定物种。结合 K2p、ecorPrimers 和 DNA 多态性分析结果,经过 PCR 和 sangger 测序,可以从 4 个 Inula 物种中区分出 8 个区域。祖先特征状态的重建揭示了茵蛛属物种从长刺到替代花瓣形式的一系列变化。对分化时间的调查显示,茵乌拉在上新世晚期,特别是大约 3.245 Mya 期间经历了分化。这些发现将有助于建立其进化联系和分类分类。
The Complete Chloroplast Genome of Inula britannica: Unraveling the Phylogeny, Evolution, and Taxonomic Significance of the Genus Inula
Inula britannica is a significant botanical species of plant in the Asteraceae family. The dried capitulum of this plant has been utilized as a traditional Chinese herbal remedy, exhibiting therapeutic properties in treating edema, alleviating nausea, and preventing vomiting. The formal designation for Inula britannica has been assigned to Pentanema britannicum. The whole chloroplast genome of I. britannica was constructed de novo in this study. The genomic characteristics were assessed and subsequently compared to those of five Inula species. I. britannica’s chloroplast genome had a length of 150,774 base pairs. The observed structure had a characteristic quadripartite arrangement, comprising a substantial single-copy section, a smaller single-copy region, and a pair of inverted repeat regions, measuring 82,451 bp, 18,423 bp, and 24,950 bp in length, respectively. The genome has been shown to have 109 distinct genes, comprising 79 protein-coding genes, four rRNA genes, and 26 tRNA genes. The chloroplast genome of I. britannica was found to have 49 lengthy repetitive sequences and 69 simple sequence repeats. The findings of the phylogenetic analysis revealed a significant correlation among I. britannica, I. janopinca, and I. linariifolia, followed by I. hupehensis. Our proposal suggests that “Inula britannica” is a more appropriate label for this particular species than “Pentanema britannicum.” Combining the K2p, ecorPrimers, and DNA polymorphic analysis results, eight regions can be distinguished from four Inula species after PCR and sangger sequencing. The reconstruction of ancestral character states revealed a series of changes from long spurs to alternative petal forms in the Inula species. The investigation of divergence time revealed that Inula underwent diversification during the late Pliocene period, specifically around 3.245 Mya. These findings will aid in establishing its evolutionary connections and taxonomy classification.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.