应用深度学习研究 NMDA 受体。

Q4 Biochemistry, Genetics and Molecular Biology Methods in molecular biology Pub Date : 2024-01-01 DOI:10.1007/978-1-0716-3830-9_16
Zhenfeng Deng, Ruichu Gu, Han Wen
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引用次数: 0

摘要

人工智能在过去十年中取得了长足的进步,彻底改变了我们的思维方式,为包括药物开发在内的各个领域带来了前所未有的机遇。大型预训练模型(如 ChatGPT)的出现甚至已经开始在某些任务中展示出人类水平的性能。然而,非专业人员部署和使用人工智能和预训练模型的困难限制了其实际应用。为了克服这一难题,我们在这里介绍了基于大型化学预训练模型 Uni-Mol 的三种高度易用的在线工具,用于中枢神经系统疾病的药物开发,包括针对 NMDA 受体的药物:血脑屏障(BBB)渗透性预测、定量结构-活性关系(QSAR)分析系统,以及基于人工智能的分子生成模型 VD-gen 的多功能界面。我们相信,这些资源将有效弥合前沿人工智能技术与 NMDAR 专家之间的差距,促进快速、合理的药物开发。
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Application of Deep Learning for Studying NMDA Receptors.

Artificial intelligence underwent remarkable advancement in the past decade, revolutionizing our way of thinking and unlocking unprecedented opportunities across various fields, including drug development. The emergence of large pretrained models, such as ChatGPT, has even begun to demonstrate human-level performance in certain tasks.However, the difficulties of deploying and utilizing AI and pretrained model for nonexpert limited its practical use. To overcome this challenge, here we presented three highly accessible online tools based on a large pretrained model for chemistry, the Uni-Mol, for drug development against CNS diseases, including those targeting NMDA receptor: the blood-brain barrier (BBB) permeability prediction, the quantitative structure-activity relationship (QSAR) analysis system, and a versatile interface of the AI-based molecule generation model named VD-gen. We believe that these resources will effectively bridge the gap between cutting-edge AI technology and NMDAR experts, facilitating rapid and rational drug development.

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来源期刊
Methods in molecular biology
Methods in molecular biology Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
2.00
自引率
0.00%
发文量
3536
期刊介绍: For over 20 years, biological scientists have come to rely on the research protocols and methodologies in the critically acclaimed Methods in Molecular Biology series. The series was the first to introduce the step-by-step protocols approach that has become the standard in all biomedical protocol publishing. Each protocol is provided in readily-reproducible step-by-step fashion, opening with an introductory overview, a list of the materials and reagents needed to complete the experiment, and followed by a detailed procedure that is supported with a helpful notes section offering tips and tricks of the trade as well as troubleshooting advice.
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