Jasmin Šutković , Annissa Van Wieren , Ensar Peljto , Ahmet Yildirim
{"title":"通过耐镉基因表达分析甘蓝品种的植物修复潜力","authors":"Jasmin Šutković , Annissa Van Wieren , Ensar Peljto , Ahmet Yildirim","doi":"10.1016/j.jgeb.2024.100381","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><p><em>Brassica oleracea</em> var. <em>acephala</em>, commonly referred to as kale, is a well-documented plant species, a food crop but well recognized for its capacity to endure and manage the accumulation of heavy metals. In this research, the phytoremediation potential of kale was evaluated based on cadmium intake, utilizing three distinct kale varieties originating from Bosnia and Herzegovina. All kales were grown in controlled conditions, with different concentrations of cadmium (Cd), a known strong pollutant found in small concentrations in soil under normal environmental conditions. After the root length analysis and cadmium atomic spectrometry, we utilized quantitative PCR (qPCR) and cycle threshold (Ct) values to calculate the expression levels of five genes associated with Cd heavy metal response: Mitogen-activated protein kinase 2 (MAPK<sub>2</sub>), Farnesylated protein 26 and 27 (HIPP<sub>26</sub>, HIPP<sub>27</sub>), Natural resistance-associated macrophage protein 6 (RAMP<sub>6</sub>), and Heavy metal accumulator 2 (HMA<sub>2</sub>).</p></div><div><h3>Results</h3><p>The atomic reader's analysis of rising cadmium concentrations revealed a proportional decline in the length of kale roots. The gene expression levels corresponded to cadmium stress differently among varieties, but mostly showing notable up-regulations under Cd stress, indicating the strong Cd presence within the plant.</p></div><div><h3>Conclusions</h3><p>This study demonstrated differences in gene expression behavior among three <em>B. oleracea</em> varieties from Bosnia and Herzegovina, indicating and filtering the Cd-resistant kale, and kale varieties suitable for phytoremediation. For the first time, such a study was conducted on kale varieties from Bosnia and Herzegovina, analyzing the impact of cadmium on the growth and resilience of these species.</p></div>","PeriodicalId":53463,"journal":{"name":"Journal of Genetic Engineering and Biotechnology","volume":"22 2","pages":"Article 100381"},"PeriodicalIF":3.5000,"publicationDate":"2024-05-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1687157X24000842/pdfft?md5=30ad8512efc7ed67a221c4cc7c1d0a52&pid=1-s2.0-S1687157X24000842-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Phytoremediation potential of Brassica oleracea varieties through cadmium tolerance gene expression analysis\",\"authors\":\"Jasmin Šutković , Annissa Van Wieren , Ensar Peljto , Ahmet Yildirim\",\"doi\":\"10.1016/j.jgeb.2024.100381\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background</h3><p><em>Brassica oleracea</em> var. <em>acephala</em>, commonly referred to as kale, is a well-documented plant species, a food crop but well recognized for its capacity to endure and manage the accumulation of heavy metals. In this research, the phytoremediation potential of kale was evaluated based on cadmium intake, utilizing three distinct kale varieties originating from Bosnia and Herzegovina. All kales were grown in controlled conditions, with different concentrations of cadmium (Cd), a known strong pollutant found in small concentrations in soil under normal environmental conditions. After the root length analysis and cadmium atomic spectrometry, we utilized quantitative PCR (qPCR) and cycle threshold (Ct) values to calculate the expression levels of five genes associated with Cd heavy metal response: Mitogen-activated protein kinase 2 (MAPK<sub>2</sub>), Farnesylated protein 26 and 27 (HIPP<sub>26</sub>, HIPP<sub>27</sub>), Natural resistance-associated macrophage protein 6 (RAMP<sub>6</sub>), and Heavy metal accumulator 2 (HMA<sub>2</sub>).</p></div><div><h3>Results</h3><p>The atomic reader's analysis of rising cadmium concentrations revealed a proportional decline in the length of kale roots. The gene expression levels corresponded to cadmium stress differently among varieties, but mostly showing notable up-regulations under Cd stress, indicating the strong Cd presence within the plant.</p></div><div><h3>Conclusions</h3><p>This study demonstrated differences in gene expression behavior among three <em>B. oleracea</em> varieties from Bosnia and Herzegovina, indicating and filtering the Cd-resistant kale, and kale varieties suitable for phytoremediation. For the first time, such a study was conducted on kale varieties from Bosnia and Herzegovina, analyzing the impact of cadmium on the growth and resilience of these species.</p></div>\",\"PeriodicalId\":53463,\"journal\":{\"name\":\"Journal of Genetic Engineering and Biotechnology\",\"volume\":\"22 2\",\"pages\":\"Article 100381\"},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2024-05-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S1687157X24000842/pdfft?md5=30ad8512efc7ed67a221c4cc7c1d0a52&pid=1-s2.0-S1687157X24000842-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Genetic Engineering and Biotechnology\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1687157X24000842\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Biochemistry, Genetics and Molecular Biology\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Genetic Engineering and Biotechnology","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1687157X24000842","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Biochemistry, Genetics and Molecular Biology","Score":null,"Total":0}
引用次数: 0
摘要
背景Brassica oleracea var. acephala,通常被称为羽衣甘蓝,是一种有据可查的植物物种,是一种粮食作物,但其承受和管理重金属积累的能力也得到了广泛认可。在这项研究中,根据镉的摄入量,利用波斯尼亚和黑塞哥维那的三个不同甘蓝品种,对甘蓝的植物修复潜力进行了评估。所有甘蓝都是在受控条件下生长的,镉(Cd)的浓度各不相同,在正常环境条件下,镉是一种已知的强污染物,在土壤中的浓度很小。在根长分析和镉原子光谱分析之后,我们利用定量 PCR(qPCR)和周期阈值(Ct)计算了与镉重金属反应相关的五个基因的表达水平:结果 原子读数仪对镉浓度上升的分析表明,甘蓝根的长度成比例地下降。该研究表明,波斯尼亚和黑塞哥维那的三个甘蓝品种在基因表达行为上存在差异,这表明并筛选出了抗镉甘蓝和适合植物修复的甘蓝品种。这是首次对波斯尼亚和黑塞哥维那的甘蓝品种进行此类研究,分析镉对这些品种的生长和恢复能力的影响。
Phytoremediation potential of Brassica oleracea varieties through cadmium tolerance gene expression analysis
Background
Brassica oleracea var. acephala, commonly referred to as kale, is a well-documented plant species, a food crop but well recognized for its capacity to endure and manage the accumulation of heavy metals. In this research, the phytoremediation potential of kale was evaluated based on cadmium intake, utilizing three distinct kale varieties originating from Bosnia and Herzegovina. All kales were grown in controlled conditions, with different concentrations of cadmium (Cd), a known strong pollutant found in small concentrations in soil under normal environmental conditions. After the root length analysis and cadmium atomic spectrometry, we utilized quantitative PCR (qPCR) and cycle threshold (Ct) values to calculate the expression levels of five genes associated with Cd heavy metal response: Mitogen-activated protein kinase 2 (MAPK2), Farnesylated protein 26 and 27 (HIPP26, HIPP27), Natural resistance-associated macrophage protein 6 (RAMP6), and Heavy metal accumulator 2 (HMA2).
Results
The atomic reader's analysis of rising cadmium concentrations revealed a proportional decline in the length of kale roots. The gene expression levels corresponded to cadmium stress differently among varieties, but mostly showing notable up-regulations under Cd stress, indicating the strong Cd presence within the plant.
Conclusions
This study demonstrated differences in gene expression behavior among three B. oleracea varieties from Bosnia and Herzegovina, indicating and filtering the Cd-resistant kale, and kale varieties suitable for phytoremediation. For the first time, such a study was conducted on kale varieties from Bosnia and Herzegovina, analyzing the impact of cadmium on the growth and resilience of these species.
期刊介绍:
Journal of genetic engineering and biotechnology is devoted to rapid publication of full-length research papers that leads to significant contribution in advancing knowledge in genetic engineering and biotechnology and provide novel perspectives in this research area. JGEB includes all major themes related to genetic engineering and recombinant DNA. The area of interest of JGEB includes but not restricted to: •Plant genetics •Animal genetics •Bacterial enzymes •Agricultural Biotechnology, •Biochemistry, •Biophysics, •Bioinformatics, •Environmental Biotechnology, •Industrial Biotechnology, •Microbial biotechnology, •Medical Biotechnology, •Bioenergy, Biosafety, •Biosecurity, •Bioethics, •GMOS, •Genomic, •Proteomic JGEB accepts