从成矿环境中进行放线菌生物勘探。

IF 4 2区 生物学 Q1 GENETICS & HEREDITY Microbial Genomics Pub Date : 2024-05-01 DOI:10.1099/mgen.0.001253
César Aguilar, Amir Alwali, Madeline Mair, Lorena Rodriguez-Orduña, Haydeé Contreras-Peruyero, Ramya Modi, Carson Roberts, Nelly Sélem-Mojica, Cuauhtemoc Licona-Cassani, Elizabeth Ivy Parkinson
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引用次数: 0

摘要

来自放线菌群的天然产物是许多临床相关疗法的灵感源泉。尽管早期在天然产物发现方面取得了巨大成功,但新化合物的发现率却在下降,这就需要采取创造性的方法。一种有前途的策略是探索生存环境的挑战。据推测,这些严酷的环境会促使细菌发展化学适应能力(如天然产物),从而使其得以生存。这项研究的重点是矿石形成环境,特别是氟化物矿,这些环境通常具有极端的 pH 值、盐度和营养稀缺性。在这里,我们利用元基因组学、代谢组学和进化基因组挖掘技术,对这些恶劣环境中的生物多样性和新陈代谢进行了剖析。这项工作揭示了这些细菌的生物合成潜力,并证明了它们生产生物活性次生代谢物的能力。这项研究是在氟化物开采区进行生物勘探的一项开创性工作,为探索未知的微生物生态系统及其以前未曾探索过的天然产品提供了见解。
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Actinomycetota bioprospecting from ore-forming environments.

Natural products from Actinomycetota have served as inspiration for many clinically relevant therapeutics. Despite early triumphs in natural product discovery, the rate of unearthing new compounds has decreased, necessitating inventive approaches. One promising strategy is to explore environments where survival is challenging. These harsh environments are hypothesized to lead to bacteria developing chemical adaptations (e.g. natural products) to enable their survival. This investigation focuses on ore-forming environments, particularly fluoride mines, which typically have extreme pH, salinity and nutrient scarcity. Herein, we have utilized metagenomics, metabolomics and evolutionary genome mining to dissect the biodiversity and metabolism in these harsh environments. This work has unveiled the promising biosynthetic potential of these bacteria and has demonstrated their ability to produce bioactive secondary metabolites. This research constitutes a pioneering endeavour in bioprospection within fluoride mining regions, providing insights into uncharted microbial ecosystems and their previously unexplored natural products.

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来源期刊
Microbial Genomics
Microbial Genomics Medicine-Epidemiology
CiteScore
6.60
自引率
2.60%
发文量
153
审稿时长
12 weeks
期刊介绍: Microbial Genomics (MGen) is a fully open access, mandatory open data and peer-reviewed journal publishing high-profile original research on archaea, bacteria, microbial eukaryotes and viruses.
期刊最新文献
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