{"title":"树莓根腐病病原体 Phytophthora gonapodyides 的基因组资源。","authors":"Rishi R Burlakoti, Sanjib Sapkota, Mark Lubberts","doi":"10.7150/jgen.94500","DOIUrl":null,"url":null,"abstract":"<p><p><i>Phytophthora gonapodyides</i> is a newly reported oomycetes pathogen associated with root rot of red raspberry. We generated high-quality whole genome resource for <i>P. gonapodyides</i>, which was pathogenic on red raspberry. The genome size was 88,717,598 bp with a BUSCO completeness score of 93.9%. This genome resource provides insight on pathogen biology of <i>Phytophthora</i> spp. causing root rot of raspberry. To our best knowledge, this is the first complete genome assembly of plant pathogenic <i>P. gonapodyides</i>.</p>","PeriodicalId":15834,"journal":{"name":"Journal of Genomics","volume":"12 ","pages":"55-57"},"PeriodicalIF":0.0000,"publicationDate":"2024-04-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11093715/pdf/","citationCount":"0","resultStr":"{\"title\":\"Genome Resource of Raspberry Root Rot Pathogen <i>Phytophthora gonapodyides</i>.\",\"authors\":\"Rishi R Burlakoti, Sanjib Sapkota, Mark Lubberts\",\"doi\":\"10.7150/jgen.94500\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Phytophthora gonapodyides</i> is a newly reported oomycetes pathogen associated with root rot of red raspberry. We generated high-quality whole genome resource for <i>P. gonapodyides</i>, which was pathogenic on red raspberry. The genome size was 88,717,598 bp with a BUSCO completeness score of 93.9%. This genome resource provides insight on pathogen biology of <i>Phytophthora</i> spp. causing root rot of raspberry. To our best knowledge, this is the first complete genome assembly of plant pathogenic <i>P. gonapodyides</i>.</p>\",\"PeriodicalId\":15834,\"journal\":{\"name\":\"Journal of Genomics\",\"volume\":\"12 \",\"pages\":\"55-57\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-04-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11093715/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Genomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.7150/jgen.94500\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Genomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.7150/jgen.94500","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
Phytophthora gonapodyides 是一种新报道的与红树莓根腐病有关的卵菌病原体。我们为红树莓上的致病菌 P. gonapodyides 生成了高质量的全基因组资源。基因组大小为 88,717,598 bp，BUSCO 完整性评分为 93.9%。该基因组资源有助于我们深入了解引起覆盆子根腐病的噬菌体病原生物学。据我们所知，这是第一个完整的植物致病性 P. gonapodyides 基因组组装。
Genome Resource of Raspberry Root Rot Pathogen Phytophthora gonapodyides.
Phytophthora gonapodyides is a newly reported oomycetes pathogen associated with root rot of red raspberry. We generated high-quality whole genome resource for P. gonapodyides, which was pathogenic on red raspberry. The genome size was 88,717,598 bp with a BUSCO completeness score of 93.9%. This genome resource provides insight on pathogen biology of Phytophthora spp. causing root rot of raspberry. To our best knowledge, this is the first complete genome assembly of plant pathogenic P. gonapodyides.
期刊介绍：
Journal of Genomics publishes papers of high quality in all areas of gene, genetics, genomics, proteomics, metabolomics, DNA/RNA, computational biology, bioinformatics, and other relevant areas of research and application. Articles published by the journal are rigorously peer-reviewed. Types of articles include: Research paper, Short research communication, Review or mini-reviews, Commentary, Database, Software.
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