Xue Xia , Ying Li , Guobei Xiao , Kun Zhan , Jinhua Yan , Chao Cai , Yuming Fang , Guofu Huang
{"title":"视网膜眼底疾病诊断深度模型和大规模数据集的基准测试","authors":"Xue Xia , Ying Li , Guobei Xiao , Kun Zhan , Jinhua Yan , Chao Cai , Yuming Fang , Guofu Huang","doi":"10.1016/j.image.2024.117151","DOIUrl":null,"url":null,"abstract":"<div><p>Retinal fundus imaging contributes to monitoring the vision of patients by providing views of the interior surface of the eyes. Machine learning models greatly aided ophthalmologists in detecting retinal disorders from color fundus images. Hence, the quality of the data is pivotal for enhancing diagnosis algorithms, which ultimately benefits vision care and maintenance. To facilitate further research in this domain, we introduce the Eye Disease Diagnosis and Fundus Synthesis (EDDFS) dataset, comprising 28,877 fundus images. These include 15,000 healthy samples and a diverse range of images depicting various disorders such as diabetic retinopathy, age-related macular degeneration, glaucoma, pathological myopia, hypertension retinopathy, retinal vein occlusion, and Laser photocoagulation. In addition to providing the dataset, we propose a Transformer-joint convolution network for automated eye disease screening. Firstly, a co-attention structure is integrated to capture long-range attention information along with local features. Secondly, a cross-stage feature fusion module is designed to extract multi-level and disease-related information. By leveraging the dataset and our proposed network, we establish benchmarks for disease screening and grading tasks. Our experimental results underscore the network’s proficiency in both multi-label and single-label disease diagnosis, while also showcasing the dataset’s capability in supporting fundus synthesis. (<em>The dataset and code will be available on</em> <span>https://github.com/xia-xx-cv/EDDFS_dataset</span><svg><path></path></svg>.)</p></div>","PeriodicalId":49521,"journal":{"name":"Signal Processing-Image Communication","volume":"127 ","pages":"Article 117151"},"PeriodicalIF":3.4000,"publicationDate":"2024-05-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S0923596524000523/pdfft?md5=243413eb9a59b33a94d00c614393aaf1&pid=1-s2.0-S0923596524000523-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Benchmarking deep models on retinal fundus disease diagnosis and a large-scale dataset\",\"authors\":\"Xue Xia , Ying Li , Guobei Xiao , Kun Zhan , Jinhua Yan , Chao Cai , Yuming Fang , Guofu Huang\",\"doi\":\"10.1016/j.image.2024.117151\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Retinal fundus imaging contributes to monitoring the vision of patients by providing views of the interior surface of the eyes. Machine learning models greatly aided ophthalmologists in detecting retinal disorders from color fundus images. Hence, the quality of the data is pivotal for enhancing diagnosis algorithms, which ultimately benefits vision care and maintenance. To facilitate further research in this domain, we introduce the Eye Disease Diagnosis and Fundus Synthesis (EDDFS) dataset, comprising 28,877 fundus images. These include 15,000 healthy samples and a diverse range of images depicting various disorders such as diabetic retinopathy, age-related macular degeneration, glaucoma, pathological myopia, hypertension retinopathy, retinal vein occlusion, and Laser photocoagulation. In addition to providing the dataset, we propose a Transformer-joint convolution network for automated eye disease screening. Firstly, a co-attention structure is integrated to capture long-range attention information along with local features. Secondly, a cross-stage feature fusion module is designed to extract multi-level and disease-related information. By leveraging the dataset and our proposed network, we establish benchmarks for disease screening and grading tasks. Our experimental results underscore the network’s proficiency in both multi-label and single-label disease diagnosis, while also showcasing the dataset’s capability in supporting fundus synthesis. (<em>The dataset and code will be available on</em> <span>https://github.com/xia-xx-cv/EDDFS_dataset</span><svg><path></path></svg>.)</p></div>\",\"PeriodicalId\":49521,\"journal\":{\"name\":\"Signal Processing-Image Communication\",\"volume\":\"127 \",\"pages\":\"Article 117151\"},\"PeriodicalIF\":3.4000,\"publicationDate\":\"2024-05-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S0923596524000523/pdfft?md5=243413eb9a59b33a94d00c614393aaf1&pid=1-s2.0-S0923596524000523-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Signal Processing-Image Communication\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0923596524000523\",\"RegionNum\":3,\"RegionCategory\":\"工程技术\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Signal Processing-Image Communication","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0923596524000523","RegionNum":3,"RegionCategory":"工程技术","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
Benchmarking deep models on retinal fundus disease diagnosis and a large-scale dataset
Retinal fundus imaging contributes to monitoring the vision of patients by providing views of the interior surface of the eyes. Machine learning models greatly aided ophthalmologists in detecting retinal disorders from color fundus images. Hence, the quality of the data is pivotal for enhancing diagnosis algorithms, which ultimately benefits vision care and maintenance. To facilitate further research in this domain, we introduce the Eye Disease Diagnosis and Fundus Synthesis (EDDFS) dataset, comprising 28,877 fundus images. These include 15,000 healthy samples and a diverse range of images depicting various disorders such as diabetic retinopathy, age-related macular degeneration, glaucoma, pathological myopia, hypertension retinopathy, retinal vein occlusion, and Laser photocoagulation. In addition to providing the dataset, we propose a Transformer-joint convolution network for automated eye disease screening. Firstly, a co-attention structure is integrated to capture long-range attention information along with local features. Secondly, a cross-stage feature fusion module is designed to extract multi-level and disease-related information. By leveraging the dataset and our proposed network, we establish benchmarks for disease screening and grading tasks. Our experimental results underscore the network’s proficiency in both multi-label and single-label disease diagnosis, while also showcasing the dataset’s capability in supporting fundus synthesis. (The dataset and code will be available onhttps://github.com/xia-xx-cv/EDDFS_dataset.)
期刊介绍:
Signal Processing: Image Communication is an international journal for the development of the theory and practice of image communication. Its primary objectives are the following:
To present a forum for the advancement of theory and practice of image communication.
To stimulate cross-fertilization between areas similar in nature which have traditionally been separated, for example, various aspects of visual communications and information systems.
To contribute to a rapid information exchange between the industrial and academic environments.
The editorial policy and the technical content of the journal are the responsibility of the Editor-in-Chief, the Area Editors and the Advisory Editors. The Journal is self-supporting from subscription income and contains a minimum amount of advertisements. Advertisements are subject to the prior approval of the Editor-in-Chief. The journal welcomes contributions from every country in the world.
Signal Processing: Image Communication publishes articles relating to aspects of the design, implementation and use of image communication systems. The journal features original research work, tutorial and review articles, and accounts of practical developments.
Subjects of interest include image/video coding, 3D video representations and compression, 3D graphics and animation compression, HDTV and 3DTV systems, video adaptation, video over IP, peer-to-peer video networking, interactive visual communication, multi-user video conferencing, wireless video broadcasting and communication, visual surveillance, 2D and 3D image/video quality measures, pre/post processing, video restoration and super-resolution, multi-camera video analysis, motion analysis, content-based image/video indexing and retrieval, face and gesture processing, video synthesis, 2D and 3D image/video acquisition and display technologies, architectures for image/video processing and communication.